Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00596 ATGGCTTCTCGCAACCACAGCACCAGCAAAAAGGTGGGCCCCGAAGAAGCTTCTCTCGACAAGCGTCGCAGGATCCTCGGAGCTGACAAGATGGACCGACAGCAGGGCGGTAGTAGGGTCAGAACGCCGTTTTCCGTCGTCACCAACACCGCAGCAACGAGTGACACTGCCAATGCGGCCGAAGGCGCCGCTGTCGTCGTTGATTTCACGAAGGACGAGGTGGAGGCGTTGCTCAATGAGAAGAAGAAGGGGAACACCTATGATAATAAGAAAAAGATTGAGCAGATGATGGATCTTATTAAGCGCCTTAAGCTCTGCGTTCGGTGGTTTAAGAGAATTGAAGAAGGGTATATGCAAGAAAAGGAAAAGCTTCAATCTGAGCTAGAGACTGCTGAGAAGAAGTGCACTGATACTGGGACTGAGATGAAGAGTAAGATTGAGGAGTTGGAAGAGACTGTATCTGATTTGAGGAAGACAATTTCTTCTCTAGAAGAGAGAATTGTAAAGGAAGAATCGGATAAATTGGAAGCAATTAATTCTTATGGTAAAGAAAAGGAAGCCAGAACTGAAGCTGAGAAAGTTCGGGATGAGAAATCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGTTGCTGTGAAGAAGGCCATTTCAAATGAGGACTTGTACAAGCGATCACAAGAGTATAATATGAGCCTGCAGCAGTACAATAGTCGTCTTCAGTCAGATCTTGAAACTGTTAATGAAGCCCATAAACGACTTGAAACAGAGAAAGCAACAATTGTTGAGAGCCTTAGCAATGTAAGAGGCCACAATAAGGCATTGCAGGATCAATTGGTGTCTCTTAAAgtttcacaagacgaggctataaagcagaaagaaattttagcaaatgagctcaaatgccttcgtgaagagttaaaacaaattagagatgatcgtgattgccaattgggtcaagtacatgctttaactggagaaatagcaaagtacaaagaatatacagggaaaacatgtacacaattggatacgttgatgattaaaacaaatgctcttgagGAGACTTGTTCATCTCAAAAAGAGCAAATACATATACTGCAGCAGCAGTTGTTTGCTGAAAAGGAAAAGTTTAAGaatgctgacttatcttctttagaaacaagaacaatgtttgaagagcagaagagaattatccgtgaactacaggatcgattggcagatatagaatttcaagttatggaaggagagatgctaaggaaaaaactgcacaacactatcctgGAGCTAAAAGGAAATATTCGTGTGTTCTGCCGTGTGCGGCCGCTCCTACCAGAGGACAGTACAGGAACAGACATGGCTGTTTCTTTCCCTACGTCAACAGAAGTGCTTGATCGGGGCATTGATTTGGTACAAAGCGggcagaagtacaatttcacatttgacaaggtgtttaatcatgaggcttctcagcaggaggttttcatagagatatcacagctggtacaaagtgcacttgatggcttcaaggtgtgcatctttgcatatggacagacaggttcaggaaaaacctatactatgatgggtaagcctgatgcgccagatctgaaaggattgataccacgttctttagaacagatattccagattagccagtctctaaaagaccaagggtggaagtacacaatgcatgttagtatacttcgtcctgattttcaattttcatgtgaccacatctacaaatggaaactgaaaaatttaattaaatgttttcaggtatcactatatgaaatatataatgagaccatcagggatttgttatcattaaatcggtcaagtgggaatgatcatacacgaatggaaaatagtgctcccactcccagcaagcagcacactattaaacatgaatctgacctcgccacactggaagtttgtagcgtggatgagatttcctccctcctacaacaggctgcacaaagcagGTCAGTGGGAAGAACACAGATGAATGAACAGTCATCCAGAAGCCACTTTGTCTTTAAATTGCGTATAAGTGGGAGAAATGAGAGAACTGAAAAACAAGTGCAAGGTGTGTTAAACCTGATTGATCTGGCTGGAAGTGAAAGACTGTCAAGGAGTGGGGCAACTGGGGACCGGTTAAAGGAAACTCAGGCTATCAACAAAAGTCTCTCGTCTTTGAGCGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTTAGGAATTCAAAGCTGACACACTTTCTCCAGCCATATCTTGGTGGGGATTCCAAAACGTTGATGTTTGTCAACGTATCACCTGATCAATCTTCAGCTGGCGAATCACTCTGCTCTCTCCGCTTTGCAGCCAGAGTCAATGCCTGTGAAATTGGGATTCCACGGCGTCAGACTCAGACATCAACACGCTCCTCAGAGTCCCGGTTGAGCTATGGTTAA 2457 0.2837 MASRNHSTSKKVGPEEASLDKRRRILGADKMDRQQGGSRVRTPFSVVTNTAATSDTANAAEGAAVVVDFTKDEVEALLNEKKKGNTYDNKKKIEQMMDLIKRLKLCVRWFKRIEEGYMQEKEKLQSELETAEKKCTDTGTEMKSKIEELEETVSDLRKTISSLEERIVKEESDKLEAINSYGKEKEARTEAEKVRDEKSAELEKVRDEKSVAVKKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETVNEAHKRLETEKATIVESLSNVRGHNKALQDQLVSLKVSQDEAIKQKEILANELKCLREELKQIRDDRDCQLGQVHALTGEIAKYKEYTGKTCTQLDTLMIKTNALEETCSSQKEQIHILQQQLFAEKEKFKNADLSSLETRTMFEEQKRIIRELQDRLADIEFQVMEGEMLRKKLHNTILELKGNIRVFCRVRPLLPEDSTGTDMAVSFPTSTEVLDRGIDLVQSGQKYNFTFDKVFNHEASQQEVFIEISQLVQSALDGFKVCIFAYGQTGSGKTYTMMGKPDAPDLKGLIPRSLEQIFQISQSLKDQGWKYTMHVSILRPDFQFSCDHIYKWKLKNLIKCFQVSLYEIYNETIRDLLSLNRSSGNDHTRMENSAPTPSKQHTIKHESDLATLEVCSVDEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFKLRISGRNERTEKQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTHFLQPYLGGDSKTLMFVNVSPDQSSAGESLCSLRFAARVNACEIGIPRRQTQTSTRSSESRLSYG 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00596 818 Coils Coil 391 411 - -
Gma08g00596 818 ProSitePatterns Kinesin motor domain signature. 695 706 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma08g00596 818 SMART kinesin_4 430 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00596 818 Coils Coil 114 173 - -
Gma08g00596 818 MobiDBLite consensus disorder prediction 9 36 - -
Gma08g00596 818 MobiDBLite consensus disorder prediction 613 632 - -
Gma08g00596 818 PANTHER KINESIN-LIKE PROTEIN KLP-3 590 818 - -
Gma08g00596 818 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 567 - -
Gma08g00596 818 MobiDBLite consensus disorder prediction 613 629 - -
Gma08g00596 818 PRINTS Kinesin heavy chain signature 665 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00596 818 PRINTS Kinesin heavy chain signature 696 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00596 818 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00596 818 PRINTS Kinesin heavy chain signature 745 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00596 818 Coils Coil 349 369 - -
Gma08g00596 818 Pfam Kinesin motor domain 438 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00596 818 Gene3D Kinesin motor domain 374 797 IPR036961 -
Gma08g00596 818 PANTHER KINESIN-LIKE PROTEIN 590 818 - -
Gma08g00596 818 PANTHER KINESIN-LIKE PROTEIN 29 567 - -
Gma08g00596 818 Coils Coil 188 208 - -
Gma08g00596 818 CDD KISc_C_terminal 430 797 - -
Gma08g00596 818 Coils Coil 237 257 - -
Gma08g00596 818 Coils Coil 286 320 - -
Gma08g00596 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 793 IPR027417 -
Gma08g00596 818 MobiDBLite consensus disorder prediction 1 44 - -
Gma08g00596 818 ProSiteProfiles Kinesin motor domain profile. 432 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00596 Gma-Chr8 4902388 4909169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00596 393 792 Calmodulin-binding Proteins AT5G65930 37.288 1.24e-69 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00596 K10405 - gmx:100818140 1464.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01813 07 39291908 39308478 Gma08g00596 08 4902388 4909169 GST
Gma08g00596 08 4902388 4909169 Gma15g00599 15 4917733 4923829 PCT
Gma08g00596 08 4902388 4909169 Gma13g02235 13 37252277 37258320 PCT
Gma15g00599 15 4917733 4923829 Gma08g00596 08 4902388 4909169 PCT
Gma13g02235 13 37252277 37258320 Gma08g00596 08 4902388 4909169 PCT