Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00591 ATGAACTGGCCTACCTTAACTTTCACAATAGGAATTTGCATAGGCTTTGTGGTTGGGGTGAGTTTGGCATTATCGATTGTATCCTGCGTCATACGTGGAAGGAAGCGCACAGACATTGAGAGGAGCAGTTCTCACAGTGCAGTGACCATTCCTGTTCAGGTCCAAGTGGTTGATTCTAACTCAACATTATCAGAGGGTCAGGAATCACCCAGAACATCTGAGTGGAGTAACACATCTATATGGTTGGAAAGACTTAGGAGGAATAGTTCAGTGTCAGCATGTGGAATTCCCAAGTATTTTTACAAAGATATACAAAAGGCTACTTCTAATTTCACAACCATCATAGGCAATGGAGCATTTGGTCCTGTTTATAAAGCGCAGATGGATACAGGTGAGACAGTTGCTGTTAAAGTTCTTGGCACTAATTCAAGGCAAGGGGAACAGGAGTTTTTAACTGAGGTTTTATTACTTGGAAGATTACATCACAAAAGCCTTGTGGATTTGGTGGGATATGTGGCAGAAAGAGGAAAACATATGCTTCTTTACATTTACATGAGCAATGGCAGTCTTGATTCCCATTTATATGCTGATTTGGGAAAAaatcacaagccattgagctgggatttgaggcttagcatagcgctagatgttgcaagaggactggaatatctacatcatGGGGCTTCTCCACCTGTTGTGCACCGTGACATCAAATCTTGCAATATACTGTTGGACCAGTCTATGAGAGCCAAGGTCACTGATTTTGGGCTTTCCAGACCAGAGATGATCAAACCTCGCACATCAAATGTCAGAGGAACTTTTGGATATGTTGATCCCGAGTATTTGTCTACAAGAACCTTCACTAAGAAAAGCGATGTTTATAGTTTTGGTGTGCTACTGTTTGAACTTATCACTGGCAGGAATCCACAGCAAGGGCTCATGGAATATGTAAAACTAGCAGTCATGGAAAGCGAGGGTAAGGTTGGATGGGAAGAAATTGTGGACCCACAATTAAATGGAAAATATGATGTGCATAATCTTCATGACATGGCTTCACTTGCATTCAAATGTGTTAATGAAGTCTCCAAAAGCCGACCTTCGATGTGCGAAATTGTTCAAGAATTATCTCAGATTTGTAAGAGGCAAATTAAAGATCATGGTGGAACATCTCCTGCTGCATTGAAGGAAGTGTCCATTGAAGTGGGCCAGACTGAAATTCAGGACTTCTCATCAATTGAGAGTTCAAAGATGGTGCGCAGATTGCATAGCCGATGA 1275 0.3906 MNWPTLTFTIGICIGFVVGVSLALSIVSCVIRGRKRTDIERSSSHSAVTIPVQVQVVDSNSTLSEGQESPRTSEWSNTSIWLERLRRNSSVSACGIPKYFYKDIQKATSNFTTIIGNGAFGPVYKAQMDTGETVAVKVLGTNSRQGEQEFLTEVLLLGRLHHKSLVDLVGYVAERGKHMLLYIYMSNGSLDSHLYADLGKNHKPLSWDLRLSIALDVARGLEYLHHGASPPVVHRDIKSCNILLDQSMRAKVTDFGLSRPEMIKPRTSNVRGTFGYVDPEYLSTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAVMESEGKVGWEEIVDPQLNGKYDVHNLHDMASLAFKCVNEVSKSRPSMCEIVQELSQICKRQIKDHGGTSPAALKEVSIEVGQTEIQDFSSIESSKMVRRLHSR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00591 424 PANTHER OS01G0253100 PROTEIN 2 409 IPR045271 GO:0004714|GO:0006468
Gma08g00591 424 ProSiteProfiles Protein kinase domain profile. 109 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00591 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Gma08g00591 424 SUPERFAMILY Protein kinase-like (PK-like) 93 375 IPR011009 -
Gma08g00591 424 Pfam Protein tyrosine and serine/threonine kinase 111 375 IPR001245 GO:0004672|GO:0006468
Gma08g00591 424 SMART serkin_6 109 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00591 424 Gene3D Phosphorylase Kinase; domain 1 74 184 - -
Gma08g00591 424 Gene3D Transferase(Phosphotransferase) domain 1 185 393 - -
Gma08g00591 424 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 2 409 - -
Gma08g00591 424 CDD STKc_IRAK 115 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00591 Gma-Chr8 4870451 4876034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00591 98 404 Receptor kinase-like Gene Family AT1G51820 43.396 1.33e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Gma08g00591 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00591 - - gmx:100816549 845.884