Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00576 ATGCATGATGCATCTACCCGTAAGGAAAAGATTCCTAAGTTTAGGCTTGGTCAGATAAGAGCAGTTAGGCGGCTGCAATCTTGTTCTTCATCTTTGGTATTTATTACTGACTCACTTTTCATCATTTTTTTCATTTCCAAAACACCTCATCTCTGTAATCTCAACAAGGACACGGGCATGACCACCAAACGCCAACATGCAATTCTTCTGCTCCTCTTATTCTTCTGTTCTCACACTTTGTTCTCTCATGCAGCCGATTCCATCACAGAGGACACAGTAATCAGAGACAACGATGGTGGTGACAATTTGGTGTCCAAAGACCTCacctttgaaatgggtttcttcggtttggataataataactcttcaagatacgttgggatttggtaccacgagattccggtcaaaacattcatatgggttgcaaacagagaaaaacccatcaaaggaagagaaggttcgatcctaatacaaaaaagcaacggcaacttgattgttctcgatggagagaacaacgaggtgtggtcaacaaacatgtcaGTTCCAAGGAACAACACAAAGGCTGTTCTTCGTGACGATGGAAACCTCGTTCTCTCAGAACACGACAAGGATGTTTGGCAAAGCTTTGAGGACCCAGTTGATACATTTGTGCCGGGTATGGCACTTCCAGTGAGTGCTGGAACGAACATATTCAGGTCATGGAAATCAGAAACGGATCCTTCACCGGGAAACTACTCAATGAAGGTTGACTCTGAGGGGTCAACGAAACAGATTTTGATTTTGGAGGGAGAGAAGAGAAGAAAGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCACTGGTGTCTCCGATGTGACAGGAAGCTCTCTATTTGGCTTTACAGTCATCACAGACACTAAAGGAGAGGAATATTTTACATACAAATGGAATAGCCCTGAAAAAGTGAGGTTTCAGATAACTTGGGATGGGTTTGAGAAGAAGTTCGTGTTGGATGCAGATGGGAAACAATGGAATAGGACACAGTTTGAGCCTTTTGATGACTGTGAGAAGTATAACTTTTGTGGTAGTTTTGCAGTGTGTGATACGGGTAATTCTCCTTTTTGTAGTTGCATGGAAGGGTTTGAGCCAATGCATTGGGAGGAGTGGAATAATAGGAATTGGACAAGGGGGTGTGGGAGGAGGACTCCACTGAAGGCTGAGGCTGAGAGAAGTGCTAATAATAGTTCTTCTGGAGCTGATCGTGAGGTGAGTGTTGGAGAAGATGGTTTCTTGGAGCAAAGGTGTACCAAGTTTCCGGATTTCGCACGGTTGGAGAATTTTGTTGGTGATGCGGATTGTCAGAGGTATTGTCTGCAGAATACTTCTTGTACTGCTTATTCATATACTATTGGAATCGGGTGCATGATTTGGTATGGAGAGTTAGTTGATGTTCAACACTCTCAAAATAATCTTGGAAGTTTACTCCACATCCGTCTTGCCGATGCTGATTTAGGCGATGGGGGGAAAAAGACCAAAATTTGGATAATATTAGCTGTTGTGGTAGGGCTGATCTGCATTGGAATCGTTGTATTGCTGGTATGGAGGTTTAAGAGAAAACCTAAAGTTTCCTCAGCTTCTGGTTTCAACAACAATAGCGAAATACCAGCCTTTGATCTAACGAGGAGTACAGACTTATCAGAAATTTCAGGTGAGTTAGGCTTGGAAGGGAATCAACTAAGTGGAGCAGAACTTCcattgttccattttagctgcattctagcagcaacaaacaatttctcggacgaaaataagcttggacaagggggatttggtcctgtctacaaggggaaaattccagggggagaggaagtagctgtcaagaggctttcaagaaagtctagccaaggtttagaggagttcaagaatgaaatggtgctcatagccaaactgcaacatagaaatctggttagactattggggtgttgcattcaaggggaagaaaagatactggtatatgagtacttgccaaacaaaagcttggactgctttttatttgATCCGGTGAAGCAAACACAActagattgggcaaaacgctttgaaataatcgagggcattgcaagagggctactttatctgcaccgggattctagacttagaataattcatcgtgatttaaaagcaagcaacattttgttggatgaaagcatgaatccaaaaatttcagactttggcttggccagaatatttgggggaaaccaaaatgaagccaacacaaacagagtggttggtacatatggttatatgtccccagaatatgcaatggaaggtctgttttcaatcaaatctgatgtctatagttttggtgtattgctacttgagattatgagtggccgcaagaacacaagctttcgtgacacagatgactcaagtctcattggatatGCCTGGCACCTTTGGAGTGAGCAGAGAGTAATGGAGCTTGTTGATCCTTCCCTTGGTGATTCAATTCCTAAGACTAAAGCGTTGAGGTTCATACAAATAGGGATGTTATGCGTGCAAGATTCAGCATCTCGTAGACCAAACATGTCATCTGTGTTGTTGATGCTGGGAAGTGAATCAACAGCTCTACCTTTGCCTAAGCAACCTTTGCTCACTACTTCCATGAGGATACTTGATGATGGAGAATCTTATAGCGAAGGCCTTGATGTGTCAAATGATTTGACAGTTTCAATGGTGACAACAGGGAGATAG 2730 0.2923 MHDASTRKEKIPKFRLGQIRAVRRLQSCSSSLVFITDSLFIIFFISKTPHLCNLNKDTGMTTKRQHAILLLLLFFCSHTLFSHAADSITEDTVIRDNDGGDNLVSKDLTFEMGFFGLDNNNSSRYVGIWYHEIPVKTFIWVANREKPIKGREGSILIQKSNGNLIVLDGENNEVWSTNMSVPRNNTKAVLRDDGNLVLSEHDKDVWQSFEDPVDTFVPGMALPVSAGTNIFRSWKSETDPSPGNYSMKVDSEGSTKQILILEGEKRRKWRSGYWDGRVFTGVSDVTGSSLFGFTVITDTKGEEYFTYKWNSPEKVRFQITWDGFEKKFVLDADGKQWNRTQFEPFDDCEKYNFCGSFAVCDTGNSPFCSCMEGFEPMHWEEWNNRNWTRGCGRRTPLKAEAERSANNSSSGADREVSVGEDGFLEQRCTKFPDFARLENFVGDADCQRYCLQNTSCTAYSYTIGIGCMIWYGELVDVQHSQNNLGSLLHIRLADADLGDGGKKTKIWIILAVVVGLICIGIVVLLVWRFKRKPKVSSASGFNNNSEIPAFDLTRSTDLSEISGELGLEGNQLSGAELPLFHFSCILAATNNFSDENKLGQGGFGPVYKGKIPGGEEVAVKRLSRKSSQGLEEFKNEMVLIAKLQHRNLVRLLGCCIQGEEKILVYEYLPNKSLDCFLFDPVKQTQLDWAKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDESMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLLEIMSGRKNTSFRDTDDSSLIGYAWHLWSEQRVMELVDPSLGDSIPKTKALRFIQIGMLCVQDSASRRPNMSSVLLMLGSESTALPLPKQPLLTTSMRILDDGESYSEGLDVSNDLTVSMVTTGR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00576 909 Gene3D - 80 209 IPR036426 -
Gma08g00576 909 CDD B_lectin 99 212 IPR001480 -
Gma08g00576 909 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 60 909 - -
Gma08g00576 909 ProSiteProfiles Protein kinase domain profile. 592 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00576 909 Gene3D Transferase(Phosphotransferase) domain 1 668 869 - -
Gma08g00576 909 Pfam Protein tyrosine and serine/threonine kinase 595 859 IPR001245 GO:0004672|GO:0006468
Gma08g00576 909 SMART serkin_6 592 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00576 909 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 274 IPR036426 -
Gma08g00576 909 ProSiteProfiles Bulb-type lectin domain profile. 85 211 IPR001480 -
Gma08g00576 909 CDD PAN_AP_plant 420 493 - -
Gma08g00576 909 CDD STKc_IRAK 598 862 - -
Gma08g00576 909 Pfam PAN-like domain 419 477 IPR003609 -
Gma08g00576 909 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 60 909 - -
Gma08g00576 909 Pfam D-mannose binding lectin 137 234 IPR001480 -
Gma08g00576 909 ProSiteProfiles PAN/Apple domain profile. 418 493 IPR003609 -
Gma08g00576 909 SMART ntp_6 418 492 IPR003609 -
Gma08g00576 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Gma08g00576 909 Pfam S-locus glycoprotein domain 269 377 IPR000858 GO:0048544
Gma08g00576 909 SUPERFAMILY Protein kinase-like (PK-like) 577 879 IPR011009 -
Gma08g00576 909 SMART blect_4 96 212 IPR001480 -
Gma08g00576 909 Gene3D Phosphorylase Kinase; domain 1 564 667 - -
Gma08g00576 909 PIRSF SRK 60 908 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00576 Gma-Chr8 4756015 4761037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00576 580 892 Receptor kinase-like Gene Family AT4G11530 62.025 4.40e-132 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g00576 PK_Tyr_Ser-Thr 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00576 - - gsj:114421325 1711.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01830 07 39494503 39498948 Gma08g00576 08 4756015 4761037 GST
Gma08g00576 08 4756015 4761037 Gma13g02216 13 37094802 37098456 PCT
Gma15g00616 15 5045288 5064638 Gma08g00576 08 4756015 4761037 PCT
Gma13g02213 13 37075272 37079151 Gma08g00576 08 4756015 4761037 PCT