Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00574 ATGACGTCACACTCCCACTACCCACCCGACTTAGACGCCGACTCCGTCACCTCCTCCCCACGCTCCGATCACTTCCACGACGCGCCGCCCCGCATCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGCTACGTCGGCGGCGACACCCGCATCGTCGCCGTCAACCGCTCCATCACTTTCTCCGCCCTCATTCTCAAACTCTCCAAACTCTCAGGCATGAGCAACATAACAGCcaagtaccagctcccgaacgaggatctggacgcgttgatctcggtcaccacggacgaggacgtggagaacatgatggacgagtacgacCGCGTCGCACACAATCAGAACCCGCGATCGGCGCGGCTCCGGCTCTTCCTCTTCCCCGAAGGAGAAGACTCCCGCGCCAGCAGCATCAGCTCGCTCCTAAACGGCTCAGCCAAGCGCGAAAACTGGTTCCTCGACGCTTTAAACGGCGGCGTTTCGGGCCTCGAACGAGGCCGCTCCGAAGCCTCTTCTATGGTCTCTGAAGTACCCGATTACCTCTTCGGGTTAGACAACTCCGAAGAAATAACAAATCACCAACGCGACCCGAGACCCAAACCCGGACCCATTATTCAAGATAACGTTTCCGTTTCAGATCCGGGTTCGCCCGCCCCGGTTGTCTCGTCCCCTTATTGTTCCACGTCATCAGCGCCGCCCGTGCCCTCTCTCCCGAACCTTCCCTATGTTAAAACCAAACCTTTAAACTTAAATCCGGTTCCTGATACTGACTCCAAGGAAAATCAAACCGAACCTGAAACGGAACCTCACCCGAACCTGAACCTGAACCAAAACCCGAACATGTATTCAAATAACCCTGTTGTTCACTACCCTCCAGAAGCTGCTTATTCGGCGCATTCAGTAAACCCGGTTCCGGTTTACTATGTTTCCGGTCCGGTTCGACCGGGATCCGTGCCGGTTCCTATGCAAACCCCTTATCACTACGTTCAACAATCGTATCATGCTGTGGTGCCACCTCAGGTTCCTATCGGGTACCATCCTTTGGTTCCGGGTTCGGGTCAAGTATATGGAGCGGGCGTGAGGCACATGACCCCACTGCAACCTTACAGCCCCTCCACCACGGCGGTGGTTCATGACGGTTTGAAACAGCACGTGTATCATGCCGTGCCAAATTCGGGTCCGGTTCCGGTTCACCCAGTTATTCCGATGACGGGTTTGGATGAACCGCAGAGAGGTGGAGCGTAA 1266 0.5245 MTSHSHYPPDLDADSVTSSPRSDHFHDAPPRIRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVNRSITFSALILKLSKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAHNQNPRSARLRLFLFPEGEDSRASSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEEITNHQRDPRPKPGPIIQDNVSVSDPGSPAPVVSSPYCSTSSAPPVPSLPNLPYVKTKPLNLNPVPDTDSKENQTEPETEPHPNLNLNQNPNMYSNNPVVHYPPEAAYSAHSVNPVPVYYVSGPVRPGSVPVPMQTPYHYVQQSYHAVVPPQVPIGYHPLVPGSGQVYGAGVRHMTPLQPYSPSTTAVVHDGLKQHVYHAVPNSGPVPVHPVIPMTGLDEPQRGGA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00574 421 MobiDBLite consensus disorder prediction 216 240 - -
Gma08g00574 421 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Gma08g00574 421 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 419 - -
Gma08g00574 421 CDD PB1_UP2 35 134 - -
Gma08g00574 421 PANTHER OS05G0427100 PROTEIN-RELATED 5 419 - -
Gma08g00574 421 MobiDBLite consensus disorder prediction 197 289 - -
Gma08g00574 421 SUPERFAMILY CAD & PB1 domains 47 143 - -
Gma08g00574 421 Gene3D - 52 135 - -
Gma08g00574 421 MobiDBLite consensus disorder prediction 274 289 - -
Gma08g00574 421 MobiDBLite consensus disorder prediction 1 28 - -
Gma08g00574 421 SMART PB1_new 46 136 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00574 Gma-Chr8 4743481 4745292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00574 26 171 MAP Kinase Kinase Kinase AT5G57610 45.946 1.81e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00574 - - gmx:100803004 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01832 07 39512504 39514342 Gma08g00574 08 4743481 4745292 GST