Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00568 ATGAGCGATGAAGAAGCATTCGCCGAAGCTTCGGGTCTCCGGCGAGCGGTGGAGCTAATCTTTTCAGTGCTCTCTCTCTCGTACCCGATTCGCGTCTTCTCCGGAAAATGGCAGCTGATTCGGGCCAAGTTGGAGGAGCTTCACGCCGGCCTAATCGCCGCCGAGAAATGCGACTCCGGCGAGAGCCCGTCCCTCTCGCGGCTGGCTGCGGCGGTGGTGGCCACCGCGACGGAGTGCCACGATCTGTGCCGGCGTTGCGTGGTTTTCTCATACAGCGGAAAGCTTCTGTTGCAGAGCGATTTGGACGTGGCGTTCGCGAAGCTCGATGCACACGCGAAGAAGCTCAACGAGATATACAAGACTGGAATTTTAACTAATGGGTTCGCGTTGGTGGTTTCAAAACCGAGTCTTGCCGCTTCCAAAGAGGACATGAGGTTCTACGTGAGGGACTTAACGACGAGGATGAAGGTTGGGGATTTGGGTATGAAGCGACAAGCGCTGAAGAATCTTCTGGAAGTTGTGGTGGAGGATGAGAAGTACGTGAAGGTGATTGTTGATGTTGGTGACGTGGTTCATTTGTTGGTGGGGTTTTTGGGGTCAAATGAGGTTGAGATTCAGGAGGAGAGTGCTAAGGTTGTTTCTGTTGTTGCGGGGTTTGATTCTTACAAAGGGGTTTTGATTGGCGCGGGTGTAATTGCTCCTTTGGTTAAGGTTTTGGATTGTGGGAGTGTGTTAGGTAAGGTTGCGGCTGCAAGGTGTTTGGTGAAGTTAACTGAGAATTCGGATAATGCTTGGTGTGTTTCTGCTCATGGAGGGGTTAGTGTGTTGTTGAAGATttgtggtggtgattgtggtggtgatttggtTGGACCTGCTTGTGGGGTGTTGAGGAATCTCGTTGGTGTCGAGGAGATTAAGAGGTTTATGGTTGATGAGGGTGCTGCGGTAACATTCATTAGGCTTGTGAGGTCTAAGGAGGAATCGATTCAGGTGAATTCGATAGCGTTTATTGTGAGTATTGCATCTGGTGATGAGGTTGTTAGGCAGATGGTGATCAAAGAGGGAGCGATTCACGCTTTGTTGCGCGTTTTGGATCCTAAGTGGTCTTATTCTTGTAAAACAAGGGAGGTGGCAATGAGGGCTATTGAGGATTTGTGTTTTTGCTCACCTAGTTCTGTTGGTGTTTTGATGAGTTATGGCTTTGTGGATCAATTGATATATTATGTTCGAAATGGCGAGGTTTCGATTCAGGAATTGGCATTGAAGGTGGCGTTTAGGTTGTGTGGAACATCGGAGGAGGCCAAGAAAGCAATGGGGGATGCCAGGTTTATGCCGGAGTTTGTTAAGTTTCTCAATGCAAAGTCATTTGAGGTTCGGGAAATGGCGGCGGAGGCACTCTCTGGCATGGTTATGGTGCCTAGAAATAGAAAGAGGTTTGTGCAGGATGATCATAACATAGCCCTTATTCTGCAGTTGCTTGATCCAGAGGAGGGGAATTCAGGTAATAAAAAGTTCTTGATCTCTATATTAATGTCCTTAACTAATTGTACTAGTGGGAGGAAAAAGATTGTTAGTTCAGGATATGCCAAAAACATAGAAAAGCTTGCGGATGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTCAAGAAGCTATCCACAAACCGGTTCCGCAGCATGTTGAGTGGAATCTGGCGCTCGTGA 1701 0.4727 MSDEEAFAEASGLRRAVELIFSVLSLSYPIRVFSGKWQLIRAKLEELHAGLIAAEKCDSGESPSLSRLAAAVVATATECHDLCRRCVVFSYSGKLLLQSDLDVAFAKLDAHAKKLNEIYKTGILTNGFALVVSKPSLAASKEDMRFYVRDLTTRMKVGDLGMKRQALKNLLEVVVEDEKYVKVIVDVGDVVHLLVGFLGSNEVEIQEESAKVVSVVAGFDSYKGVLIGAGVIAPLVKVLDCGSVLGKVAAARCLVKLTENSDNAWCVSAHGGVSVLLKICGGDCGGDLVGPACGVLRNLVGVEEIKRFMVDEGAAVTFIRLVRSKEESIQVNSIAFIVSIASGDEVVRQMVIKEGAIHALLRVLDPKWSYSCKTREVAMRAIEDLCFCSPSSVGVLMSYGFVDQLIYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDARFMPEFVKFLNAKSFEVREMAAEALSGMVMVPRNRKRFVQDDHNIALILQLLDPEEGNSGNKKFLISILMSLTNCTSGRKKIVSSGYAKNIEKLADAEVSSDAKRLVKKLSTNRFRSMLSGIWRS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00568 566 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 566 - -
Gma08g00568 566 SMART arm_5 177 218 IPR000225 GO:0005515
Gma08g00568 566 SMART arm_5 343 387 IPR000225 GO:0005515
Gma08g00568 566 SMART arm_5 431 471 IPR000225 GO:0005515
Gma08g00568 566 SMART arm_5 219 259 IPR000225 GO:0005515
Gma08g00568 566 SMART arm_5 260 301 IPR000225 GO:0005515
Gma08g00568 566 Gene3D - 147 555 IPR011989 -
Gma08g00568 566 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 566 - -
Gma08g00568 566 SUPERFAMILY ARM repeat 154 547 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00568 Gma-Chr8 4656167 4658049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00568 159 361 U-box Gene Family AT2G23140 25.616 3.74e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00568 - - gmx:100809062 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01839 07 39613845 39615982 Gma08g00568 08 4656167 4658049 GST
Gma08g00568 08 4656167 4658049 Gma15g00634 15 5192366 5194057 PCT
Gma08g00568 08 4656167 4658049 Gma13g02197 13 36962148 36963995 PCT
Gma15g00634 15 5192366 5194057 Gma08g00568 08 4656167 4658049 PCT
Gma13g02197 13 36962148 36963995 Gma08g00568 08 4656167 4658049 PCT