Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00560 ATGCACGGAAGGGCGCAAGAGAAGCGAGGTTTGGATTTGGCTTCCGCCGAAGAAGGTCAGCCTGATCGGAAACGACCTGCGTTGGCTAGTGTAATTGTTGAGGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTTGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAAGCTTAATAATACTGGCAGGTCTTCCCCAAAGTGGATAGAAGGCCCTGATGGCAAAATTTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGTGAGCAAGGGACATCCATACATATTGTTTTGATTGATGCAAATACTGGCCATATTGTCACATCAGGGCCAGAGTCATGTGTCAGGCTAGATGTTATTGTACTAGAGGGAGATTTCAATAATGAGGATGATGATAATTGGGATGAAGAAGAGTTTGATAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTAACTGGTGATCTGCAAGTCACACTGAAGGAGGGTTTAGGTACACTTGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTTAGATTGGGGCTGAAAGTTGCCTCAGGTTGTTGTGAGGAAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACAGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCGCCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGTAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAATATATACGGTTGAAGACTTCTTAAGATTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGAAATGTGGGTGTTGTTTTCAATAATATTTATGAATTAAGCGGCTTAATTGCCAACGACCAATATTACTCAGCTGATTCTCTCTCCGAGAATCAGAAGGTTTATGTAGACACGTTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGATAAATGACAACGAGGATAAGACTTTGGATACCACTCATCCTCAGGCTCCAATGACTTCCCATGAATATTCAAACTCACTTCAGCAGATATCCATCCCAGCTTTGCCACTTCCATTACATCCTGGCCAGCCTTCAGTGGATTCAGGAGTAGCCGTTGGAGGTTATCATGATGGGACAGCTTCCAGATTCTCCTTGCAACCACATCCTAATCTTAATTCTTCCATTCAGTTTGATGATAATGCATTTCCACTGCAAAACCAGTTGATGAGTGTTTCACACCATACCCAACTTCCAAGAAATGAAAATGGGCGGACTGTTGGTCCTCCACAATCATCCACGCATGGTTTTGAGCCTCTCACCATTTCAAATCCTACTTACAGAGGAGCTGAAGAGTACTTCCCAGAGGAGGAAATTCGTATTAGAAGTAATGAGATGCTAGAAAATAACGATATGCAGCATCTTCTCCGTATTTTTAACATGGGAGGCCAATCACATCCTACCCTTAATGCTCAGGATGATGGGTACCCTAGTTCATCTACATACATTTCTGCAAACCCCATGGGCTACAATTTTGATGATGAACCAAACCGTTCCTCGGGAAAAGCTGTTGTGGGCTGGCTCAAGCTGAAGGCTGCTTTAAGATGGGGTATTTTTATTCGGAAACAGGCTGCTGAGAGACGTGCACAGCTCGTTGAACTGGATGACCCATAG 1875 0.4384 MHGRAQEKRGLDLASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNNTGRSSPKWIEGPDGKILQLHFKTRLSLPLFTGGKVEGEQGTSIHIVLIDANTGHIVTSGPESCVRLDVIVLEGDFNNEDDDNWDEEEFDSHIVKEREGKRPLLTGDLQVTLKEGLGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRFVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLINDNEDKTLDTTHPQAPMTSHEYSNSLQQISIPALPLPLHPGQPSVDSGVAVGGYHDGTASRFSLQPHPNLNSSIQFDDNAFPLQNQLMSVSHHTQLPRNENGRTVGPPQSSTHGFEPLTISNPTYRGAEEYFPEEEIRIRSNEMLENNDMQHLLRIFNMGGQSHPTLNAQDDGYPSSSTYISANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00560 624 MobiDBLite consensus disorder prediction 1 24 - -
Gma08g00560 624 PANTHER CALMODULIN-BINDING PROTEIN 3 622 - -
Gma08g00560 624 MobiDBLite consensus disorder prediction 485 508 - -
Gma08g00560 624 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Gma08g00560 624 MobiDBLite consensus disorder prediction 485 509 - -
Gma08g00560 624 PANTHER OS02G0177800 PROTEIN 3 622 IPR012416 GO:0005516
Gma08g00560 624 Pfam Calmodulin binding protein C-terminal domain 321 383 IPR046829 -
Gma08g00560 624 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00560 Gma-Chr8 4575202 4580451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00560 8 619 Calmodulin-binding Proteins AT5G57580 61.611 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00560 - - gmx:100806393 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01847 07 39708283 39714324 Gma08g00560 08 4575202 4580451 GST
Gma08g00560 08 4575202 4580451 Gma15g00639 15 5236439 5241283 PCT
Gma15g00639 15 5236439 5241283 Gma08g00560 08 4575202 4580451 PCT