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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma08g00557
ATGAATGACCTATTCTCAAACTCATTCAAGAAATACAGCAACCTGAAGCAGCAGGCACACCTCGATGACGTAGAGGCCGGGAAAGAAACCGTGAACCTCGACAAATTCTTCGAGGACGTGGAGAACGTGAAAGAAGAAATGAGAACGGTCGAGAAGCTACACAGAAAACTGCAGGAGGCGAACGAAGAGAGTAAAGTGGTGCACAATGCAAAAACAATGAAGGAGCTCCGGGCGAGGATGGACAAGGACGTGGAGCAGGTCCTTAAGCGCGTGAAAGTAATCAAGGGGAAATTAGAGGCCTTGGAGCGTTCCAACGCCGCCAACAGAAACATCCCTGGCTGCGGTCCGGGTTCCTCGGCGGACAGAACCAGAACCTCGGTTGTTAGTGGATTGGGGAAGAAGCTGAAGGACATGATGGACGATTTCCAAGGTCTGAGAACAAGGTTGATGCAGATGGAGTACAAGGAGACCGTGGAGCGAAGATATTTTACGATAACCGGAGAGAAGCCCGATAAGGAGACTATAGAGAACTTGATATGGAGTGGGGAGAGTGAGAGTTTTCTGCAGAGGGCGATTCAGGAGCAGGGGAAGGGACAAATAATGGACACAATTTCGGAGATTCAGGAGCGGCACGACGCGGTGAAGGAGATTGAAAAGAATTTGATTGAGTTGCACCAAGTGTTCTTGGACATGGCGGCTCTGGTGGAGTCGCAGGGGCAGCAGCTAAATAATATAGAGAGCCACGTGGCGCATGCGAGTTCCTTCGTGAGACGCGGCACGGATCAGCTTCAGGATGCTAGAGAGTATCAGAAGAGTTCGAGGAAGTGGACGTGCTATGCAATCATTCTTGGCCTTGTGCTTCTTCTTGTGCTCTTGTTTCCAATCTTGATTAACCTTTTGCCTCATTTGTTAAGGGTGCATGAGATGGAATCCTACCTTCCTGAACCACACTGTTCCTAG
960
0.4969
MNDLFSNSFKKYSNLKQQAHLDDVEAGKETVNLDKFFEDVENVKEEMRTVEKLHRKLQEANEESKVVHNAKTMKELRARMDKDVEQVLKRVKVIKGKLEALERSNAANRNIPGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQGLRTRLMQMEYKETVERRYFTITGEKPDKETIENLIWSGESESFLQRAIQEQGKGQIMDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNNIESHVAHASSFVRRGTDQLQDAREYQKSSRKWTCYAIILGLVLLLVLLFPILINLLPHLLRVHEMESYLPEPHCS
319
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma08g00557
319
Pfam
SNARE domain
241
292
IPR000727
-
Gma08g00557
319
Gene3D
-
30
163
-
-
Gma08g00557
319
SMART
SynN_4
28
155
IPR006011
GO:0016020
Gma08g00557
319
SUPERFAMILY
t-snare proteins
32
259
IPR010989
GO:0016020|GO:0016192
Gma08g00557
319
PANTHER
SYNTAXIN
10
297
IPR045242
-
Gma08g00557
319
PANTHER
T-SNARE-RELATED
10
297
-
-
Gma08g00557
319
Coils
Coil
84
104
-
-
Gma08g00557
319
ProSitePatterns
Syntaxin / epimorphin family signature.
210
249
IPR006012
GO:0005484|GO:0006886|GO:0016020
Gma08g00557
319
SMART
tSNARE_6
199
266
IPR000727
-
Gma08g00557
319
Pfam
Syntaxin
35
239
IPR006011
GO:0016020
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma08g00557
Gma-Chr8
4560702
4561845
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma08g00557
1
304
SNARE and Associated Proteins
AT1G61290
77.961
1.27e-178
494
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma08g00557
K08486
-
gmx:100805869
571.237
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma08g00557
08
4560702
4561845
Gma15g00642
15
5267503
5268417
PCT
Gma08g00557
08
4560702
4561845
Gma13g02189
13
36894526
36895440
PCT
Gma15g00642
15
5267503
5268417
Gma08g00557
08
4560702
4561845
PCT
Gma13g02189
13
36894526
36895440
Gma08g00557
08
4560702
4561845
PCT
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