Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00541 ATGGCAGTGGGAATGGGAAGTGAGGGTATGGTTTTGACCACGTTGATTTTGACGTCCGGGGCCAGCGGCCGAATCCTTGGCTTCTTCAACGCCCTCCTTTTGCTCCTTCTCTATCTCTTCCCCACCACCACCATGCGCCTCGCCTCCTGGAAGAGTACCTCCACGTGGACGTCGTCGAGGAGGGCGTTGGCCATTCGGAGGGTGTTGGAGGATGCAGATTCAGATGGAACCACATTCAGGGAGTACCATCTCTTTTCAACCTCAAGGTGTGACACCATTTTTACCCAGTCTTGGATTCCTCGCTCTCCTAGCAATACCATCAGGGGACTTGTTATTCTTATGCATGGACTTAATGAACACAGTGGCAGATATACTCATTTCGCAAAGCACCTCAATGCTAATGGTTTCAAGGTTTACGGGATGGATTGGCTTGGCCACGGTGGAAGTGATGGGTTGCATGGTTATGTCCATTCTCTTGATGATGTTGTTTCTGATACGAAAATATTTTTGGAGAAGGTTCTTAACGAAAATCCTGGGCTTCCATGTTTCTGCTTTGGACACTCAACAGGAGCAGCCATTATTCTTAAGGCTCTGCTTGACCCAAAGGTTGAATCTCGCATAGCTGGTGCTGTTTTGACATCACCAGCAGTTGGTGTTTCCCCTTCTCATCCAATTTTGCTGGCACTTGCTCCTATAGCTTCAATTTTGCTGCCAACGTATCAATGTAGTTCTGCATATAAGAAGGGGTCACCAGTGTCTAGAGACCCAGAGGCGCTAATTGCTAAATATTCTGATCCATTAGTATGTACTGGACCTCTTAGAGTACGTACTGGTTATGAGATTCTCAGAATTACAAGCTACTTGCAGCGAAATCTGAGAAAATTGAGAGTTCCATTTTTTGTTCTCCATGGCACTGCTGATTCCGTGACTGATCCCATTGCTTCACAAAAATTATATGTAGAAGCCTCCTCATCTGACAAAACTATCAGACTATACGATGGTTTCTTACATGACCTGCTCTTTGAACCCGAACGAGATGCTATCACACAGGACATAATTCAatggctaaacaatagagtatga 1083 0.4497 MAVGMGSEGMVLTTLILTSGASGRILGFFNALLLLLLYLFPTTTMRLASWKSTSTWTSSRRALAIRRVLEDADSDGTTFREYHLFSTSRCDTIFTQSWIPRSPSNTIRGLVILMHGLNEHSGRYTHFAKHLNANGFKVYGMDWLGHGGSDGLHGYVHSLDDVVSDTKIFLEKVLNENPGLPCFCFGHSTGAAIILKALLDPKVESRIAGAVLTSPAVGVSPSHPILLALAPIASILLPTYQCSSAYKKGSPVSRDPEALIAKYSDPLVCTGPLRVRTGYEILRITSYLQRNLRKLRVPFFVLHGTADSVTDPIASQKLYVEASSSDKTIRLYDGFLHDLLFEPERDAITQDIIQWLNNRV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00541 360 PANTHER PHOSPHOLIPASE-RELATED 65 351 - -
Gma08g00541 360 Pfam Serine aminopeptidase, S33 107 344 IPR022742 -
Gma08g00541 360 Gene3D alpha/beta hydrolase 70 360 IPR029058 -
Gma08g00541 360 SUPERFAMILY alpha/beta-Hydrolases 91 359 IPR029058 -
Gma08g00541 360 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 65 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00541 Gma-Chr8 4424087 4426814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00541 1 360 Acyl Lipid Metabolism Gene Families AT1G73480 57.421 3.77e-163 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00541 K01054 - gmx:100795212 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02403 05 44796589 44798389 Gma08g00541 08 4424087 4426814 GST
Gma08g00541 08 4424087 4426814 Gma07g00961 07 10637812 10641892 PCT
Gma08g00541 08 4424087 4426814 Gma09g01607 09 41395295 41400548 PCT