Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00538 ATGTATCAATGCCCATGGTTTACCACCAAAACTAAGGATGCGAGGAAGGACTCTGTGGCACTAGATTCTTTTGTGGTAAAAGACTTGAGTCTCCAACGTAAGCTTTTGGTATCAGAATTCAACCTGACTATTGGCAACATGGAAACAGAGCTGGCAACGAGGATGAACTGTGCTGCTCATGATGGTCATCTTGATCTTGTGAAACGTTTGATTGGATTTGGGGCAGATCCCAATAAGACTGATTACGATGGCAGAACACCCTTGGTATGA 270 0.437 MYQCPWFTTKTKDARKDSVALDSFVVKDLSLQRKLLVSEFNLTIGNMETELATRMNCAAHDGHLDLVKRLIGFGADPNKTDYDGRTPLV 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00538 89 Gene3D - 8 89 IPR036770 -
Gma08g00538 89 PANTHER CHANNEL AKT1 PROTEIN, PUTATIVE-RELATED 27 88 - -
Gma08g00538 89 PANTHER POTASSIUM CHANNEL AKT1 27 88 IPR045319 GO:0005249|GO:0006813
Gma08g00538 89 SUPERFAMILY Ankyrin repeat 29 88 IPR036770 -
Gma08g00538 89 Pfam Ankyrin repeats (many copies) 57 88 IPR002110 GO:0005515
Gma08g00538 89 ProSiteProfiles Ankyrin repeat profile. 50 82 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00538 Gma-Chr8 4405525 4406039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00538 34 89 Ion Channels AT5G37500 55.357 8.17e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00538 K21867 - gmx:100798698 120.553