Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00532 ATGGCGAGGCCAGAAAGGACAGCAGGTAGAAATAAAAGTTTAGAGACTCTAATGGACTCGGACAAACCAGGAATCGGAAGAAATGTGAACCAACTTAAGATTCAGAAGTCCATTCCAGGGTATGGCCTTGAATTCAGTAACCTCTCCTATAGTATCATAAAGAAGCAGAAAAAGGATGGAGTTTGGATCAACAAAGAATCATATCTTCTTCATGATATCTCTGGCCAGGCAATTAAAGGTGAAGTTATGGCAATCATGGGACCTAGTGGTGCTGGCAAGTCCACCTTTCTTGATGCATTGGCCGGTCGAATTGCAAAAGGGAGTCTAGAAGGATCAGTTAGAATTGATGGAAAACCAgttactacaagctacatgaaaatggtgtcatCATATGTGATGCAAGATGACCAGCTCTTCCCTATGCTGACAGTTTTTGAGACATTTATGTTTGCAGCTGAAGTTAGGCTTCCTCCTTCCATTTCCAGGAGTGAAAAGAAGAAGAGGGTCTATGAGCTCCTTGACCAATTGGGCTTACAGAGTGCTACACATACCTATATTGGTGACGAAGGGAGAAGAGGAGTGTCAGGAGGGGAACGACGAAGGGTGTCTATTGGCATAGACATCATTCATAAGCCATCACTTCTGTTCCTTGACGAACCTACTTCAGGCCTTGATTCTACAAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATAGCTCGAGGAGGAAGCATTGTCCTTATGACCATACACCAGCCTTCATTTAGAATTCAAATGCTCCTGGACCAGATCACCGTCCTTGCAAGGGGAAGACTGATATACATGGGAAAGGCAGATGAAGTTCAGGCTCACATGTCAAGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTCCTAGATGTTATCAGTGAATATGATCAAGCAACGGTTGGGCTTGATCCCCTTGTCCAATTCCAACGTGATGGCCTCAAACCTCACCCGGCAGCCATGACGCCGGTTCCAAGAACACCTTACAAAAGGAACACACCTGCATCCAAACACATGATTAGCCTACGCAGCCAAGGATTTACTGCCGGAACACAACAGCCTGATTCTGCGGACGACGAAGACGACGACGATGCTGAGGATTTTGATAACTCCCTTGAAAGGAAAAGTGCTCCAACACCAAGGAATATGACTAGTGGTGTTCACCAACGTTTGGCTTCTCAGTTCTACCAAGATTTCTCGGCCAAAGATTTCTCTGTCTGGCTTTACCATGGGGTAGTAGGAACCCCACGTCGCCAACCATCATGGACTCCAGCAAGAACTCCAGGATGGACACCTGGGAAAACACCCATGTCAGGACCAACAAGTGCAGTTTCCAACCAATATTCTGCAGCTCCTTTTGTGGTTGGCCAGTCTATGGACTACTCCGCAACTTCATATGAAGGATTTGAGATTGAGGAAGTGCTTGATGAGCCAAACTTTGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACAGCACTCAATGTAATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTGTTAGCTGTTATGGCACTTATCCTGTCCAGCATTTTTGGAAATCTGAGTCATCCTTTTTTCGAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCATCTTTTATCATGGAGAGGTTCATCTTCATAAGGGAGACTTCACATAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCCGTTCAAGGCTTCACATTTGCTGTCATAACCAAAAAGATGCTCCACTTGAGAAGCAGCCTATTGTATTTCTGGCTAATACTTTATGCCTCGCTTATTACTACCAATGCATATGTGATGCTTGTTAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTAGTCATAGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCAGATACCCTTTTACTGGATGTGGCTTCACTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTCACAAATGAATTCAATAACCTCAACTGCTACACAGGAAATTTAGCAGAATTATCCCATGGACCATTAGGAGACCTGAAGCTCAGCAAACACCATAACTCCAGTCTGCCCGCTAACTGTTTATTAGGGAAAGATATCTTGTCCTCGATGGATATTACAATGGATAACATATGGTATGACATCTTAATCCTGCTAGCTTGGGATGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAGAGGAAATGA 2385 0.4331 MARPERTAGRNKSLETLMDSDKPGIGRNVNQLKIQKSIPGYGLEFSNLSYSIIKKQKKDGVWINKESYLLHDISGQAIKGEVMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRSEKKKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDQITVLARGRLIYMGKADEVQAHMSRFGRPVPDGENSIEYLLDVISEYDQATVGLDPLVQFQRDGLKPHPAAMTPVPRTPYKRNTPASKHMISLRSQGFTAGTQQPDSADDEDDDDAEDFDNSLERKSAPTPRNMTSGVHQRLASQFYQDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPGWTPGKTPMSGPTSAVSNQYSAAPFVVGQSMDYSATSYEGFEIEEVLDEPNFGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLAVMALILSSIFGNLSHPFFEDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAVITKKMLHLRSSLLYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPFYWMWLHYISAIKYPFEALLTNEFNNLNCYTGNLAELSHGPLGDLKLSKHHNSSLPANCLLGKDILSSMDITMDNIWYDILILLAWDVLYRFFFYLVLRFYSKNERK 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00532 794 MobiDBLite consensus disorder prediction 358 399 - -
Gma08g00532 794 PANTHER ABC TRANSPORTER 6 788 - -
Gma08g00532 794 MobiDBLite consensus disorder prediction 327 346 - -
Gma08g00532 794 Gene3D - 42 289 IPR027417 -
Gma08g00532 794 SMART AAA_5 79 279 IPR003593 -
Gma08g00532 794 MobiDBLite consensus disorder prediction 1 21 - -
Gma08g00532 794 CDD ABCG_EPDR 43 276 - -
Gma08g00532 794 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524
Gma08g00532 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 288 IPR027417 -
Gma08g00532 794 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 788 - -
Gma08g00532 794 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 294 IPR003439 GO:0005524
Gma08g00532 794 MobiDBLite consensus disorder prediction 1 17 - -
Gma08g00532 794 MobiDBLite consensus disorder prediction 430 455 - -
Gma08g00532 794 Pfam ABC-2 type transporter 505 711 IPR013525 GO:0016020|GO:0140359
Gma08g00532 794 MobiDBLite consensus disorder prediction 433 455 - -
Gma08g00532 794 Pfam ABC transporter 70 222 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00532 Gma-Chr8 4356544 4359356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00532 69 295 Calmodulin-binding Proteins AT2G36910 29.130 3.67e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00532 K05681 - gmx:100790313 1546.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02393 05 44734568 44737515 Gma08g00532 08 4356544 4359356 GST