Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00522 ATGGAAGACTTACTCGGCCTTTTAAGGATTCACATCAAGCGCGGTGTCAACCTCGCCGTTCGTGATGTCAATACTAGCGATCCATACGTCGTCGTTAAGATGGGCAAGCAGAAGCTGAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAAGGAAGATCTTACGCTTTCTGTTACAGATCCAATTCATCCATTTATACTGacagtgtatgactatgacactttcagcaaggatgacaaaatgggagatgcagaatgtgacatctcagcatacatagaagccttaaagatgaacttagaagacctccccagtgACTCAGTTTGCAAAATCAACTCTCCTCTTGCTTCCATTTCAAATTGA 366 0.2951 MEDLLGLLRIHIKRGVNLAVRDVNTSDPYVVVKMGKQKLKTRVIKKDVNPEWKEDLTLSVTDPIHPFILTVYDYDTFSKDDKMGDAECDISAYIEALKMNLEDLPSDSVCKINSPLASISN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00522 121 Pfam C2 domain 6 92 IPR000008 -
Gma08g00522 121 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 110 IPR044562 -
Gma08g00522 121 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gma08g00522 121 Gene3D C2 domain 3 112 IPR035892 -
Gma08g00522 121 SMART C2_3c 7 102 IPR000008 -
Gma08g00522 121 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 110 - -
Gma08g00522 121 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 98 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00522 Gma-Chr8 4294156 4295586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00522 1 96 C2H2 Transcription Factor Family AT4G05330 52.083 2.78e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00522 - - gmx:100799469 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00522 08 4294156 4295586 Gma07g00918 07 10086115 10088104 PCT
Gma08g00522 08 4294156 4295586 Gma09g01108 09 28508826 28518267 PCT
Gma07g00918 07 10086115 10088104 Gma08g00522 08 4294156 4295586 PCT
Gma09g01108 09 28508826 28518267 Gma08g00522 08 4294156 4295586 PCT