Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00514 ATGTGGATGGTTGGTTACAATGAAGGAGCTGAGTTCAACATGGCCGATTATGGATTCAATGGAAGGAAACTAAGGCCTCTCATGCCAAGGCCAGTCACTTCTCCTAACAATACTTCAAACACTAACTCTCCATACTTGACCCGCATTCATCATGGCAACGATTTCTTTTCACAGTATCACAATCTTGCATCAGTGGCAGATCAGGGAAAGAGAGAGTTCAACCCTCCACCAGTAGTGGTGAGTTCAAGGTGGAATCCAACCCCGGAGCAACTGAGAGCATTGGAGGAATTGTATAGAAGAGGGACAAGAACACCATCTGCGGAGCAAATCCAACAAATCACGGCACAGCTTAGGAGGTTTGGAAAAATTGAAGGGAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGACAGAAACGCCGCCGTCAAATGGAGTCAGTTGTAGCTGAGGGTCATCACACCCGTGACTTTGATAGTACTCTTGAAAAGAAAGACTTCGGCGCAAGTAGGACAGTGCTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTACTCTTGCAGAGGAATCTGTTACAATACAAAGGGCAGCAAAAGCAGCCATTGCAGAGTGTAGAACAGATGGATGGCTCCAATTCGATGAAGGAGAGTTACAACATAGAAGAAACTTTATGGAGAGGAATGCCACGTGGCATATGATGCAGTTACCTTGTCCTCCCCCTCCTACAGTTTCACCCCACCTCATAAACACACCATCTCCTACTACTAGCATGGCCCCCGCAACCACAGTAACAGCAAGACTAATGGACCCAAAGCTCATTAAGACTCATGATCTCAGCTTCTTTATTTCACCTAACACTAACAGAGAAAACGGTATTATCCACTTAAGCAGTATCAGCACCCAGGATCATAATAATTCTGTGGAATCTCAAACCCTTCAACTTTTTCCAATAAGGAACAACGCGGATGAAAGCAGCTGTGATAACATCAACCACCAAAAAGAGACAGAGGTATCCGTTTCAGCAATGAATGCACCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTGA 1092 0.4469 MWMVGYNEGAEFNMADYGFNGRKLRPLMPRPVTSPNNTSNTNSPYLTRIHHGNDFFSQYHNLASVADQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESVVAEGHHTRDFDSTLEKKDFGASRTVLEVEQTKNWAPSTNCSTLAEESVTIQRAAKAAIAECRTDGWLQFDEGELQHRRNFMERNATWHMMQLPCPPPPTVSPHLINTPSPTTSMAPATTVTARLMDPKLIKTHDLSFFISPNTNRENGIIHLSSISTQDHNNSVESQTLQLFPIRNNADESSCDNINHQKETEVSVSAMNAPSQFFEFLPLKN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00514 363 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Gma08g00514 363 PANTHER WUSCHEL, PUTATIVE-RELATED 11 363 - -
Gma08g00514 363 Gene3D - 80 142 - -
Gma08g00514 363 SMART HOX_1 79 146 IPR001356 GO:0003677
Gma08g00514 363 CDD homeodomain 83 143 IPR001356 GO:0003677
Gma08g00514 363 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 363 IPR044555 GO:0003700|GO:0099402
Gma08g00514 363 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Gma08g00514 363 SUPERFAMILY Homeodomain-like 82 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00514 Gma-Chr8 4248288 4250785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00514 1 363 Wox Gene Family AT3G18010 39.186 4.30e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma08g00514 Homeodomain 9.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00514 - - gmx:100785161 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00514 08 4248288 4250785 Gma08g00514 08 4248288 4250785 ECH
Gma05g02381 05 44650778 44652897 Gma08g00514 08 4248288 4250785 GST