Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00504 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCCAATCAATCAGAAGATGCCCAAGGGGCTACTTCATCAAAGAGCAACAAGTCCAGTAGTGATGGTTCATCTTCATCCACTGCCCCAAAGAAGCTTTCCAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAACCTGGCTAGAGGAGAAATAATGGACCCGTCTGATTCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCTGATTCAGCGAGGCGTGATTCGGAGTCTAGCACGTCGAGGGATCCTGAAGTGGAGGAGGAGTATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGATCCCGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCCTGTGACCCTGATAATACGCCAGCTGAAGTTGTGGCCTACCGTTACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTCAGATGGTTTCTATGATCTGTATGGGATCTTGACCGAGGCAACCTCTGCAAGAATGCCTTCTCTTGTAGATCTGCAAGGAACACCGACCTCAGATGATGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAACAAGAAGCCATGGAGATGGCCGTCAATTCAAGAAAAGATTTTGAAGTAGTTTTAGATAGTGATTTGGTACACAAGCTTGCAATAGTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCACGAAAGTATGTTAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGTTCACTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTCAAGGTTTTAGCTGACACTTTGGGCATCCCGTGTCGATTGGTGAAAGGACTGCAGTATATGGGTTCCAACGATGTGGCAATGAACTTTGTCAAGATTGAGGATGGAAGGGAGTACATTGTTGACCTAATGGCAGCTCCTGGAACACTTATTCCATCTGATGCTACTGGATCACACATTGAGTGTGACGATTCTTCCTTTGTAGCCAGTCCTTCATCAAGAGAGCTTGATTCTCATGTAGCATCGTTCAGCAGTGGGGTTGGAAGTTCATCTGAAGAAGCTTCTGACTCTGGTACTCTGGATAAAGATAATAAATCAAAGTATTTTGGCTATGCAAGGAAAGAATCCAATGTAAGCGGGGCTGCTACGGGCAAGGAAGAATTGAAGAGACCATCAAATGAATCCAATAATACCCCCTATGAGGAGAAGATCATACTGCAAGAATCCCCTATCAGATCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCCGTGCGTAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCTAAGGAGAACCCTAACTTGGCTCAAAAACTTCATGATATTTTGCTTGAAAGTGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATTTATCATGGGCAGTTAAGTACCCCAACCGAGGCCAATTTTCCAACTGAACAAAAAGATGAAAATAAACAAGGAAGTGTGCAGCAAGAAACTAAGACTGATGACAATCTAGTTCCTGCTCGATTTTTGCCTCCTTTGCCTCACCACCGAGTTCACCGCAAAGTAACTCCTAGCAGTAGCAGTCAGCTGGAGCATTCTAAGCCTGTTGAGGGCTTAGGAATTGGCCTTCCTCTTGATTCAGGGGAAGCTGCTGGACAGCACATATCATCACAGGTAGAAGCAACTCAGGTAAAGTATGGGAAAAATATGCcagttgcggcagctgcagctgcagctgctgctgttgttgcatcttctatggtagttgctgtaacaaagtcgaacgctgactcgaatcttgagattcctgtagcagcagctgctactgctactgctgcagctgttgtagcaaccactgctgctgTAAGTAAGCAGTATGAGCAGGGAAGTTGGAGTGGTGGTGATACAGAGGGTGCTGGTTGTGAGCCGAAGTGTAGTGGTGATGGAGAGCATAATGCTTTAGGAGAAAACACAGAAGGCGAGAGAAAATCTGATCGATCAGTAAGTAATGACAGCACAAAGTCTGATTCAGCGCTAGATGATGTTGCTGAGTATGATATTCCGTGGGATGAAATTGCGGTGGGAGAGCGTATTGGACTTGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAAAAGCTTCTATATCAAGATATCTCTGGTGAATTACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGAGGTTGCAGATGGCCCTTGATGCTGCTCGAGGAATGAACTATCTGCACAACTGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTAGTAAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACGGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGACGTTTTTAGCTATGGGGTCATACTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCGATGCAAGTAGTGGGTGCTGTTGGTTTCCAACATCGCCGCCTTGACATTCCAGATAATGTAGACCCTGCCATTGCAGATATTATCAGACAATGCTGGCAGACTGATCCAAAGTTGAGGCCCACGTTTACTGAAATCATGGCTGCTTTAAAGCCATTGCAGAAGCCAATTACTGCTTCTCAAGTGCATAGACTAAGTGTTCAGTCATCACGAGTTGCTGAAGACCCCGCAGGATAG 3054 0.4175 MKNILKKLHIMSNQSEDAQGATSSKSNKSSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPSPNLARGEIMDPSDSVSSGGLDVVSDSARRDSESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTEATSARMPSLVDLQGTPTSDDVTWEAVLVNRAADSNLLKLEQEAMEMAVNSRKDFEVVLDSDLVHKLAIVVAEYMGGSVEDHESMLRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADTLGIPCRLVKGLQYMGSNDVAMNFVKIEDGREYIVDLMAAPGTLIPSDATGSHIECDDSSFVASPSSRELDSHVASFSSGVGSSSEEASDSGTLDKDNKSKYFGYARKESNVSGAATGKEELKRPSNESNNTPYEEKIILQESPIRSNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDILLESGVVAPPNLFSEIYHGQLSTPTEANFPTEQKDENKQGSVQQETKTDDNLVPARFLPPLPHHRVHRKVTPSSSSQLEHSKPVEGLGIGLPLDSGEAAGQHISSQVEATQVKYGKNMPVAAAAAAAAAVVASSMVVAVTKSNADSNLEIPVAAAATATAAAVVATTAAVSKQYEQGSWSGGDTEGAGCEPKCSGDGEHNALGENTEGERKSDRSVSNDSTKSDSALDDVAEYDIPWDEIAVGERIGLGSYGEVYRGEWHGTEVAVKKLLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLQMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIADIIRQCWQTDPKLRPTFTEIMAALKPLQKPITASQVHRLSVQSSRVAEDPAG 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00504 1017 MobiDBLite consensus disorder prediction 373 396 - -
Gma08g00504 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 856 868 IPR008271 GO:0004672|GO:0006468
Gma08g00504 1017 MobiDBLite consensus disorder prediction 8 61 - -
Gma08g00504 1017 MobiDBLite consensus disorder prediction 699 715 - -
Gma08g00504 1017 SMART serkin_6 737 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00504 1017 MobiDBLite consensus disorder prediction 85 103 - -
Gma08g00504 1017 Gene3D Phosphorylase Kinase; domain 1 730 814 - -
Gma08g00504 1017 MobiDBLite consensus disorder prediction 673 724 - -
Gma08g00504 1017 MobiDBLite consensus disorder prediction 373 389 - -
Gma08g00504 1017 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1007 - -
Gma08g00504 1017 MobiDBLite consensus disorder prediction 1 103 - -
Gma08g00504 1017 Pfam Ethylene-responsive protein kinase Le-CTR1 142 345 - -
Gma08g00504 1017 SUPERFAMILY Protein kinase-like (PK-like) 722 988 IPR011009 -
Gma08g00504 1017 MobiDBLite consensus disorder prediction 520 547 - -
Gma08g00504 1017 CDD STKc_MAP3K-like 743 989 - -
Gma08g00504 1017 PRINTS Tyrosine kinase catalytic domain signature 811 824 IPR001245 GO:0004672|GO:0006468
Gma08g00504 1017 PRINTS Tyrosine kinase catalytic domain signature 850 868 IPR001245 GO:0004672|GO:0006468
Gma08g00504 1017 PRINTS Tyrosine kinase catalytic domain signature 897 907 IPR001245 GO:0004672|GO:0006468
Gma08g00504 1017 PRINTS Tyrosine kinase catalytic domain signature 916 938 IPR001245 GO:0004672|GO:0006468
Gma08g00504 1017 PRINTS Tyrosine kinase catalytic domain signature 960 982 IPR001245 GO:0004672|GO:0006468
Gma08g00504 1017 ProSiteProfiles Protein kinase domain profile. 737 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00504 1017 MobiDBLite consensus disorder prediction 520 534 - -
Gma08g00504 1017 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1007 - -
Gma08g00504 1017 Gene3D Transferase(Phosphotransferase) domain 1 816 1001 - -
Gma08g00504 1017 ProSitePatterns Protein kinases ATP-binding region signature. 743 765 IPR017441 GO:0005524
Gma08g00504 1017 Pfam Protein tyrosine and serine/threonine kinase 738 989 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00504 Gma-Chr8 4175170 4182243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00504 1 1003 MAP Kinase Kinase Kinase AT1G73660 62.231 0.0 1143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma08g00504 PK_Tyr_Ser-Thr 4.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00504 - - gmx:100780884 1914.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00504 08 4175170 4182243 Gma08g00504 08 4175170 4182243 ECH
Gma08g00504 08 4175170 4182243 Gma07g00911 07 9952294 9965181 PCT
Gma08g00504 08 4175170 4182243 Gma09g01646 09 41953911 41965977 PCT
Gma07g00911 07 9952294 9965181 Gma08g00504 08 4175170 4182243 PCT
Gma09g01646 09 41953911 41965977 Gma08g00504 08 4175170 4182243 PCT