Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00471 ATGGGTCTTGGTTTGAAGATGAAGAGCCTGAGGCACCATCCCATGGCCTTGAAGATACATGAGCAAGCGGGGAGCAAAAGAAAGTACACTTTCATTCAGGCACATAGGGCCTGGCTTCCCAAGTTTTTGATGCTGTGGATCCTTCTCATGGCTCTAATTGGCTGTTTCATCTTTAGTAAAATGGATGCTGACACTAAAGTCAGAAGGAAAGAGGTGCTGGGTAGCCTCTGCGATCAAAGGGCTAGAATGCTGCAAGATCAATTTAGTGTTAGTGTCAACCATGTCCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGAACCCCTTCTGCCATTGACCAGGAAACCTTTGCAGAGTATACAGCCAGGACAGCATTTGAACGGCCATTACTCAGTGGGGTAGCCTATGCACAAAGAGTAGTTAACTCAGAGAGGGAAACATTTGAGAAGCAACATGGTTGGGTTATAAAGACAATGGAAAGAGAGCCTTCACTGGTTAGAGATGAGTATGCACCGGTGATATTTGTGCAAGAAACTCTCTCTTACCTCGAATCTATTGATATGATGTCCGGGGAGGAGGACCGAGAAAATATTTTGAGGGCTAGGGCCACTGGGAAAGCTGTTCTCACTAGTCCTTTTAGGCTGTTGGGGTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTATAAATCTAAGCTCCCTCCAAAGCCAACAATGGAAGAGCGAATTAAAGCAACTGCAGGATATGTTGGAGGATCCTTTGACGTTGAGTCCCTCGTGGAGAATTTACTTGGTCAACTTGCTGGTCACCAAGCAATTTTGGTGAACGTATATGATATCACAAACTCTACTGACCACTTAATCATGTATGGCAACCAAAACGAAGAAGGTGATATGTCTCTTGTCCATGAAAGTAAGCTTGATTTTGGAGATTCATACAGGAAACATACAATGATATGTAGGTATCACCAGAAGGCACCAACAAATTGGATAGCACTTACCACAGCATTCTTATTCTTTGTAATTCTTTTATTAGTGGGTTATATTTTATATGGTGCTGGAAATCACATTGTCAAAGTAGAGGATGATTTTCATCAAATGGAGGAATTAAAAGTGCGAGCAGAAGCAGCTCATGTTGCCAAGTCACAGTTTCTAGCTACTGTCTCTCATGAAATTAGAACACCCATGAATGGCATTTTAGGAATGCTTGGTCTGCTTCTAAAGACAGAATTGAGTTCAACTCAACGTGATTATGCCCAGACTGCTCAAGCATGTGGGAAGGCTCTGATAGCATTAATAAATGAGGTACTTGACCGGGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAAGCTGTTCCATTTGACATTCGTTCCATACTTGATGATGTCCTTTCTCTTTTTTCTGAAAAGTCTCGGAACAAAGGTTTAGAGCTGGCGGTGTTTGTTTCTGATAAAGTTCCAGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATAGTAACAAATCTTGTTGGCAACTCTGTTAAATTCACTGAGCGAGGACATGTATTTGTGAAAGTCCATCTATCTGAAAATAGAATGTCCACGATGAATGGAAAAATTGAGAAATTTCTAAACGGAGGATTGGACGAACCTGTGCATATGTCTGGTGGTTATAATTCCAAAACTTTAAGTGGATATGAAGCAGCTGATGAGCGGAACAGCTGGGACAATTTTAAGCATCTAATTGCCGATGAAGAATTTTTCTATGATGCTTCTGTTAAAAGGGTGGCAAGCGAATCTTATGAGCAAGTCACCTTGATGGTCAGTGTGGAGGACACTGGAATTGGAATTCCTTTCTCAGCCCAAGATAGGATTTTCATGCCTTTCGTGCAGGCAGACAGCTCAACCTCTCGACATTATGGTGGTACTGGCATTGGCTTGAGTATCAGTAAGTGCCTGGTCGAACTAATGGGTGGTGAGATAAGTTTCATAAGCCAACCGCAGGTTGGGAGCACATTTTCATTTACTGCAGATTTTGGAACAATTAAGAAAAATGCAATAACTGACATGAAGAAACATAATTTGGAAGATCTGCCTTCCAATTTTAGAGGGCTTAAAGCCATAGTGGTTGATGGAAAACCTGTTAGAGCAGCAGTGACTAGATACCATCTGAAGAGACTAGGGATACAGGCTAAAGTTGCAAATAGCTTCAATAAGGCTGTTTCTTTATGTGGGAAAAATGGTTGTTTGACCTCGGGATTATTTCAGCCCGATATTATTTTTGTCGAGAAAGATTCATGGGTTTGTGTAGAGGATGGGATCTTCAATGTGTGGCAACTGGACTGGAAACAGAATCGGCATATATTTAAGATACCTCAGATGATACTTCTTGCGACCAACATCGGTAATGATGAATTTGATAAAGCTAAAGCTGCAGGTTTCAGCGATACTGTGATCATGAAGCCCCTAAGAGCTAGCATGGTGGCTGCTTGTCTTCAGCAAGTTCTGGGAACGGGGAAGAAGAGGCAACACGGGAAAGACATGAATCCTAATGGTTCCACTTTTGTAAGAAGCCTTCTTTGCGGGAAAAAAATCTTAGTGGTTGATGACAATGTGGTAAACCGGAGGGTAGCTGCAGGTGCATTAAAAAATTTTGGAGCTGATGTGACGTGTGCAGAAAGTGGCAAAACTGCTCTTGAAATGCTGCAGTTGCCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTTTGAAGCAACTAGGCAAATTCGGATGATGGAGACAAAGGCAAATGAGCAGCAGATGAATGGTGAATGTGGTGAAGGAAATGGATGGAAAGACAAGAAGTACCATATACCTATATTGGCCATGACAGCTGATGTGATTCACGCAACATACGATGAGTGCGTGAAATGTGGGATGGACGGATATGTCTCAAAGCCTTTTGAGGAAGAGAATCTGTATCAAGCAGTTGCAAAGTTTTTCAACCCCAAGCCTACCTCAATACAACAAAATGCCAGAACTGGAAAAGCAACTTAA 3051 0.4205 MGLGLKMKSLRHHPMALKIHEQAGSKRKYTFIQAHRAWLPKFLMLWILLMALIGCFIFSKMDADTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRTPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSERETFEKQHGWVIKTMEREPSLVRDEYAPVIFVQETLSYLESIDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTMEERIKATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDITNSTDHLIMYGNQNEEGDMSLVHESKLDFGDSYRKHTMICRYHQKAPTNWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHQMEELKVRAEAAHVAKSQFLATVSHEIRTPMNGILGMLGLLLKTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDIRSILDDVLSLFSEKSRNKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHVFVKVHLSENRMSTMNGKIEKFLNGGLDEPVHMSGGYNSKTLSGYEAADERNSWDNFKHLIADEEFFYDASVKRVASESYEQVTLMVSVEDTGIGIPFSAQDRIFMPFVQADSSTSRHYGGTGIGLSISKCLVELMGGEISFISQPQVGSTFSFTADFGTIKKNAITDMKKHNLEDLPSNFRGLKAIVVDGKPVRAAVTRYHLKRLGIQAKVANSFNKAVSLCGKNGCLTSGLFQPDIIFVEKDSWVCVEDGIFNVWQLDWKQNRHIFKIPQMILLATNIGNDEFDKAKAAGFSDTVIMKPLRASMVAACLQQVLGTGKKRQHGKDMNPNGSTFVRSLLCGKKILVVDDNVVNRRVAAGALKNFGADVTCAESGKTALEMLQLPHNFDACFMDIQMPEMDGFEATRQIRMMETKANEQQMNGECGEGNGWKDKKYHIPILAMTADVIHATYDECVKCGMDGYVSKPFEEENLYQAVAKFFNPKPTSIQQNARTGKAT 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00471 1016 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 674 IPR036890 -
Gma08g00471 1016 Pfam His Kinase A (phospho-acceptor) domain 383 448 IPR003661 GO:0000155|GO:0007165
Gma08g00471 1016 SMART HKATPase_4 495 679 IPR003594 -
Gma08g00471 1016 CDD HisKA 383 444 IPR003661 GO:0000155|GO:0007165
Gma08g00471 1016 SMART HisKA_10 383 448 IPR003661 GO:0000155|GO:0007165
Gma08g00471 1016 CDD REC_hyHK_CKI1_RcsC-like 863 995 - -
Gma08g00471 1016 Gene3D - 856 1004 - -
Gma08g00471 1016 Gene3D - 697 839 - -
Gma08g00471 1016 SUPERFAMILY CheY-like 699 835 IPR011006 -
Gma08g00471 1016 Coils Coil 433 453 - -
Gma08g00471 1016 Gene3D - 61 113 - -
Gma08g00471 1016 ProSiteProfiles CHASE domain profile. 110 322 IPR006189 -
Gma08g00471 1016 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 449 IPR036097 GO:0000155|GO:0007165
Gma08g00471 1016 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 677 IPR003594 -
Gma08g00471 1016 Gene3D CHASE domain 114 329 IPR042240 -
Gma08g00471 1016 SMART CHASE_2 110 295 IPR006189 -
Gma08g00471 1016 Pfam Response regulator receiver domain 863 931 IPR001789 GO:0000160
Gma08g00471 1016 Gene3D - 357 446 - -
Gma08g00471 1016 ProSiteProfiles Response regulatory domain profile. 704 834 IPR001789 GO:0000160
Gma08g00471 1016 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 1002 - -
Gma08g00471 1016 SUPERFAMILY CheY-like 860 1000 IPR011006 -
Gma08g00471 1016 SMART REC_2 861 995 IPR001789 GO:0000160
Gma08g00471 1016 Gene3D - 447 682 IPR036890 -
Gma08g00471 1016 PANTHER HISTIDINE KINASE 4 24 1002 - -
Gma08g00471 1016 ProSiteProfiles Histidine kinase domain profile. 390 679 IPR005467 -
Gma08g00471 1016 Pfam CHASE domain 113 293 IPR006189 -
Gma08g00471 1016 CDD HATPase_EvgS-ArcB-TorS-like 500 677 - -
Gma08g00471 1016 ProSiteProfiles Response regulatory domain profile. 862 999 IPR001789 GO:0000160
Gma08g00471 1016 PRINTS Bacterial sensor protein C-terminal signature 604 618 IPR004358 GO:0016310|GO:0016772
Gma08g00471 1016 PRINTS Bacterial sensor protein C-terminal signature 622 632 IPR004358 GO:0016310|GO:0016772
Gma08g00471 1016 PRINTS Bacterial sensor protein C-terminal signature 639 657 IPR004358 GO:0016310|GO:0016772
Gma08g00471 1016 PRINTS Bacterial sensor protein C-terminal signature 663 676 IPR004358 GO:0016310|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00471 Gma-Chr8 3891806 3897504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00471 24 1005 Histidine Kinase Gene Family AT2G01830 70.091 0.0 1387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma08g00471 HATPase_c 5e-31 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00471 K14489 - gmx:100818481 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02341 05 44328278 44336227 Gma08g00471 08 3891806 3897504 GST