Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00468 ATGGTGAAGCATGCACAGCTGGGTTTTGAAGGTTCTTTCATTTTTTATCTTGTTTTGGTTCTTTCTTTCCTTGTTATCTCAACTAGGTGTCAAGATGCAGAGGTAATGGGAATATTGAAGATCATGATTAATGCCCCCATTAGCTTCCAATGGACAAACCCAGATGTATGCAAATGGAGACATGTTACATGTGATTCATCTAAACGTGTGACAGCTATTCAGATTGGGAGCCAGAACCTACAAGGCTCTCTCCCTAAAGAGCTTGTCAAGTTAACATCATTGGAACGTTTTGAGTGCCAATTCAATAGTCTCACAGGGCCATTCCCCTATCTCTCAAAATCCTTGCAAAAGTTGGTAATCCATGACAACAAGTTCAGCTTCATTCCCAATGATTTCTTCAAAGGTATGAGCCATTTGCAAGAAGTGAGAATTGATGACAACCCTTTCTCTCAATGGCACATTCATGACACTCTCAGGGATTGTGTTGCACTCCATACTTTCAGTGCACAAAGTGTTGGCCTTGTGGGCACCATCCCAAACTTTTTTGGCAAAGATGGTCCATTTCCAGGTTTGGTTCTCTTGGCTTTATCTGATAATTTTCTAGAAGGTGCATTGCCTACAAGCCTATCGGATAGTTCAATAGAGAACCTTTTGGTCAATGGACAAAATAGCTTATCTAAACTTAATGGCACCCTTGTTGTGTTACAAAACATGAAGTCTTTGAGGCAAATTTGGGCTAACGGAAATTCATTCACTGGTCCTATACCTGACTTGTCACATCATGATCAACTTTCTGATGTGAATTTAAGGGATAACCAGTTAACTGGTGTTGTGCCACCCTCTTTAATCTCTCTTCCAAGTTTGAAGTTTGTGAACTTAACCAATAATTTTCTTCAAGGATCCTCTCCCATTTTCAAATATGGGGTAGGAGTTGACAATAGCATGGATAAAGGGAAAAACCAATATTGTACAGACGTGCCAGGGCAACCTTGTAGTCCGCTTGTAAATTCTTTATTATCTATTGTTGAGCCTATGGGTTATCCTCTTAAGTTTGCTCAAAATTGGCAAGGAGATGATCCATGTGCCAATAAATGGACAGGTATAATTTGCTCTGGGGGAAACATTTCAGTTATCAACTTTCAAAACATGGGTTTGTCTGGCACTATTTGTCCATGTTTTGCCAAATTTACATCTGTGACAAAGTTGCTTCTTGCTAACAATGGTTTCATTGGTACCATACCAAATGAACTTACTAGTTTGCCTCTTTTGCAAGAGTTGGATGTTTCCAATAATCATTTATATGGCAAAGTGCCACTATTTCGTAAAGATGTGGTTCTTAAATTAGCTGGGAATCCTGATATTGGTAAGGATAAACCAACTAGCTCAAGTTTCATCGACAATGGTAGCAATCATAATACTGCAATAATTATTGGTATTGTGGTAGTTGCTGTTATTATACTTATTAGCGGGGTTTTAATACTTGTTAAGTTCAAGAGAAAGTGGGAGCATGAGAGGAAAACTCAAAATCCACCTGTAATTATGGTACCTTCTCGCCGTTATGGGGATGGAACTACTAGTGCATTATTAAGTCCTATGGGTAGTGTTTACCAGGTGGAAGATCATAACATGTTAATTTCAGTTCAAGTTTTGAGAAATGTTACCAACAATTTTAGTGAAAAAAACATATTGGGGAAAGGGGGGTTTGGCACTGTATACAAAGGAGAGTTACATGATGGGACAAAGATTGCAGTGAAAAGGATGCAATCAGCAGGATTAGTGGATGAGAAAGGATTGAGTGAGTTTACAGCCGAAATTGCAGTGCTTACTAAGGTTCGGCATATAAATTTGGTTTCACTTTTGGGATTTTGCTTGGATGGAAGTGAAAGACTTCTTGTGTATGAACACATGCCTCAAGGTGCTTTAAGTAAACATTTGATTAATTGGAAAAGTGAAGGGCTAAAACCACTTGAATGGAAAACAAGGCTTGGTATTGCCTTAGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACAACAAATTTTTATCCATAGGGATCTCAAACCATCCAACATCTTGCTTGGAGATGATATGCGCGCCAAAGTATCAGACTTTGGATTAGTTCGACTTGCTCCTGAAGGAAAAACCTCATTTCAAACTAAACTTGCAGGAACTTTTGGATACATGGCACCAGAGTACGCAGCCACTGGACGACTTACAACAAAGGTTGATGTATATAGTTTTGGAGTGATCCTTATGGAGATGATAACTGGAAGGAAAGCACTTGATGACAACCAACCAGAAGAGAACGTCCACCTTGTTACATGGTTTCGTAAGATGTTATTGAACAAAAATTCATTTCAAACAACCATTGACCCAACAATTGAAGTTGATGCGGAAACCTTAGTCAATATTAACATTGTTGCTGAGTTAGCAGGGCATTGTTGTGCGAGGGAGCCTTATCAACGTCCTGATATGAGTCATGTAGTCAATGTGTTATCACCTCTTGTTGAGGTGTGGAAGCCTTCAGAAACAAATGTTGACGACATATATGGAATTGACTATGATATGACATTACCAGAAGCACTCCAAAGGTGGAAAGATTTTGAAGGAAGTAGCACCACCCTAGAATTAACATCTCCTTCTTCATCAGTGCTTCTTAATGGAAACAACACAAAGTCAAGCACATAA 2694 0.3901 MVKHAQLGFEGSFIFYLVLVLSFLVISTRCQDAEVMGILKIMINAPISFQWTNPDVCKWRHVTCDSSKRVTAIQIGSQNLQGSLPKELVKLTSLERFECQFNSLTGPFPYLSKSLQKLVIHDNKFSFIPNDFFKGMSHLQEVRIDDNPFSQWHIHDTLRDCVALHTFSAQSVGLVGTIPNFFGKDGPFPGLVLLALSDNFLEGALPTSLSDSSIENLLVNGQNSLSKLNGTLVVLQNMKSLRQIWANGNSFTGPIPDLSHHDQLSDVNLRDNQLTGVVPPSLISLPSLKFVNLTNNFLQGSSPIFKYGVGVDNSMDKGKNQYCTDVPGQPCSPLVNSLLSIVEPMGYPLKFAQNWQGDDPCANKWTGIICSGGNISVINFQNMGLSGTICPCFAKFTSVTKLLLANNGFIGTIPNELTSLPLLQELDVSNNHLYGKVPLFRKDVVLKLAGNPDIGKDKPTSSSFIDNGSNHNTAIIIGIVVVAVIILISGVLILVKFKRKWEHERKTQNPPVIMVPSRRYGDGTTSALLSPMGSVYQVEDHNMLISVQVLRNVTNNFSEKNILGKGGFGTVYKGELHDGTKIAVKRMQSAGLVDEKGLSEFTAEIAVLTKVRHINLVSLLGFCLDGSERLLVYEHMPQGALSKHLINWKSEGLKPLEWKTRLGIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKTSFQTKLAGTFGYMAPEYAATGRLTTKVDVYSFGVILMEMITGRKALDDNQPEENVHLVTWFRKMLLNKNSFQTTIDPTIEVDAETLVNINIVAELAGHCCAREPYQRPDMSHVVNVLSPLVEVWKPSETNVDDIYGIDYDMTLPEALQRWKDFEGSSTTLELTSPSSSVLLNGNNTKSST 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00468 897 SUPERFAMILY L domain-like 337 439 - -
Gma08g00468 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Gma08g00468 897 CDD STKc_IRAK 563 837 - -
Gma08g00468 897 Gene3D Transferase(Phosphotransferase) domain 1 636 854 - -
Gma08g00468 897 SUPERFAMILY L domain-like 30 305 - -
Gma08g00468 897 Gene3D Phosphorylase Kinase; domain 1 526 635 - -
Gma08g00468 897 ProSiteProfiles Protein kinase domain profile. 557 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00468 897 PANTHER OSJNBA0070M12.3 PROTEIN 12 896 - -
Gma08g00468 897 Pfam Leucine rich repeat N-terminal domain 40 65 IPR013210 -
Gma08g00468 897 Pfam Leucine rich repeat N-terminal domain 337 371 IPR013210 -
Gma08g00468 897 Gene3D Ribonuclease Inhibitor 31 329 IPR032675 -
Gma08g00468 897 SMART serkin_6 557 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00468 897 Pfam Protein kinase domain 558 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00468 897 Gene3D Ribonuclease Inhibitor 334 458 IPR032675 -
Gma08g00468 897 SUPERFAMILY Protein kinase-like (PK-like) 535 834 IPR011009 -
Gma08g00468 897 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 12 896 - -
Gma08g00468 897 ProSitePatterns Protein kinases ATP-binding region signature. 563 585 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00468 Gma-Chr8 3877289 3880496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00468 70 834 Receptor kinase-like Gene Family AT5G07280 31.470 6.45e-81 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gma08g00468 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00468 - K00924 gmx:100788903 1774.6