Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00450 ATGGCCACCACTGACGAGGAGGTTCCAACTCAATTCCCAGCACGTCTTAGGGTCCTTGCGATTGATAATGATTCGACTGTTCTTGAAACCGTTAAGCAAATGTGTAATGAATGTCATCATCAAGACAGATATTGTGTTGATGTGATACTCATTGATGTTAATATGCCAAACATGGATGGCCATGAATTCCTTCAACGTATCCGCATGGAAATTGACGTTCCTGTTATCGTGATGTCTTTAGATGATTCTACGAGCACTAAGATGCAGGCTATTAAACATGGGGCTTGTGATTATTGGAAAAAGCCTTTGCATGAGGATCAATTTAGGAATATGTGGATGCATGTTGCTAGGAAAGCCTGGAATGCGAATAGAGTAGATATGAAATCTGGCAGCTTGGAAGAAAAGCCCCAAGCAAATAAGGGGAAATCCCGTGTAATATGGGCAGAAGAAGAACGGCATATCAAATTTCTCGACGCTGCAGAGCAACTTGGGGGGATTGACAAGGCTGCGCCAAAAAGAATTCTTGAAGTGATGAAAGACCCTGGTTTGACAAGAGAGCAAGTTGCTAGTCATTTGCAGAAAGTTAGACATCAGGAGAAGAAGAAGAAGAATAATTCTGATGAGGTGAGGAAGTCATTGCCAAACACGTTTCAATTAACTACAACAGAATCCAGTGTAAGTGCCTATGGAAAAATTGAGCGTCAAGCTTTTGCTGTTAATGGCCTTGTTCCTTGTAAAACACACACAGGCATTGGTACGGAACTTACAAGTGACTTGATGCCAAAAGAGGAGCAATGGCATGCGAAACAAGGCATGACATATGATCATCCAGCTCTGTCAATATGTCCTCCTCCTCACATTCTCAATCATCATCAGTCCATGATGAATGTAGATGAAGAATCTGGATATGGGGTATGGTCTCCATCAGCTATACATGATACCATGAGACTGAGGCAGGTGCAAGAGCAGGAGCAGCAGCAAATGCAGATGAACTTCCAGTCACCTTGCATCTTCCACGATTATACTACTACTCcagcatcagcatcagcatcagcatcagcatcTTCCATTCCAGAGCAGGTGCAGGGTGGATATTTTTCTGTTCCAAATACACTCATTTCCCCATATAGCTCTAGATCCGATGATTCAATCCACGAGGAGTCTCCTGAGAACTTTGGATATGATGACGAATCATCATCAAACTAA 1206 0.4138 MATTDEEVPTQFPARLRVLAIDNDSTVLETVKQMCNECHHQDRYCVDVILIDVNMPNMDGHEFLQRIRMEIDVPVIVMSLDDSTSTKMQAIKHGACDYWKKPLHEDQFRNMWMHVARKAWNANRVDMKSGSLEEKPQANKGKSRVIWAEEERHIKFLDAAEQLGGIDKAAPKRILEVMKDPGLTREQVASHLQKVRHQEKKKKNNSDEVRKSLPNTFQLTTTESSVSAYGKIERQAFAVNGLVPCKTHTGIGTELTSDLMPKEEQWHAKQGMTYDHPALSICPPPHILNHHQSMMNVDEESGYGVWSPSAIHDTMRLRQVQEQEQQQMQMNFQSPCIFHDYTTTPASASASASASSIPEQVQGGYFSVPNTLISPYSSRSDDSIHEESPENFGYDDESSSN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00450 401 MobiDBLite consensus disorder prediction 193 209 - -
Gma08g00450 401 SUPERFAMILY CheY-like 15 126 IPR011006 -
Gma08g00450 401 Gene3D - 143 202 - -
Gma08g00450 401 Pfam Response regulator receiver domain 28 110 IPR001789 GO:0000160
Gma08g00450 401 CDD REC_typeB_ARR-like 18 116 - -
Gma08g00450 401 Gene3D - 12 142 - -
Gma08g00450 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 8 334 - -
Gma08g00450 401 MobiDBLite consensus disorder prediction 376 401 - -
Gma08g00450 401 SUPERFAMILY Homeodomain-like 141 200 IPR009057 -
Gma08g00450 401 SMART REC_2 16 112 IPR001789 GO:0000160
Gma08g00450 401 ProSiteProfiles Response regulatory domain profile. 1 116 IPR001789 GO:0000160
Gma08g00450 401 MobiDBLite consensus disorder prediction 193 215 - -
Gma08g00450 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 200 IPR017930 -
Gma08g00450 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 142 197 IPR006447 GO:0003677
Gma08g00450 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 334 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00450 Gma-Chr8 3748545 3750315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00450 7 201 Response Regulator Gene Family AT4G31920 35.169 7.79e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma08g00450 Response_reg 3.3e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00450 - K14491 gsj:114421586 616.305