Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00448 ATGGCCATGCCAAAAGAGAAAGAGGATGTTCAGAACAGTGGGAAGAGATTGAAATGTACGAGGAATGAAGAAGAAGAAAAAGAACAATATGAACAAGTTGAAGCTGATGAAGAAGAAGAAGAAGAAGAAGACAGTGAGCTTCCTCTAAAGCTAGGATTGTTCTTCTACCCAACAATACCCACTTCCTTTGTTGTATCTGATGCTCTTGAACCCGATTTTCCCATCATATATGTCAACAAGGTCTTTGAAATCGCCACTGGATATCGTGCTGACGAGGCCCTCGGTCGCAACTGTCGGTTCTTGCAGTATAGAGATCGTCGAGCTCAGAGGCGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTGTTGAGTTCCAAGGTGAACTTCTGAATTTCAGAAAGGATGGCACTCCTTTGGTGAACAGAGTGAGACTTACACTAATTCATGATGATGACGGGACTGTGACACACGTAATAGGTATCCAACTCTTTTCCGAGGCAAATATAGATCTGAACCGTGTCTCATATCCAGTCTTCAAAGAGACTTGCAATCAAGATTTTGACAAGAATGGTAAATATACTCCTAAGAGTGGACAATCATTGTACAGTCAGCACCAAGAGATGTGCAGCATTCTTCAGCTTTCTGATGAAGTCTTGGCTCACAACATTTTGTCACGCTTGACACCCAGGGATGTTGCATCCATTGGGTCTGTATGCAGGAGGGTCCGTCAATTAACAAAGAATGAGCATGTCAGGAAGATGGTATGTCAAAATGCATGGGGCAAAGAAGTGACGGGCACATTGGAACTGATGACCAAGAAGATGGGATGGGGTCGCCTGACTCGGGAACTTACCACTCTTGAAGCTGTTTGTTGGAGAAAACTGACAGTTGGAGGTGCAGTGGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAACCGACTTGTATTGTTTGGAGGTGAAGGAGTGGATATGCAACCTATGGATGACACTTTTGTTCTAAATCTTGATGCTAAAAATCCAGAATGGCGCAGGGTTAGTGTGAAATCATCCCCACCCGGAAGGTGGGGCCACACGCTCTCGTGTTTAAATGGTTCTTGGTTGGTGGTTTTTGGTGGGTGTGGTAGGCAAGGATTGCTCAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCAACATGGAGGGAGGTTTGTGGTGGAACCCCACCACTTCCTAGATCATGGCACAGCTCTTGCACAATTGAAGGGTCCAAATTGGTTGTCTCCGGCGGGTGCACAGACACCGGGGTACTTCTTAGTGACACGTATTTACTGGACCTCACAACAGATAATCCAATATGGAGAGAAATTCCAACTTCATGGGCTCCTCCTTCTCGGTTGGGCCACTCACTCTCAGTCTATGGGAGGACAAAGATTCTCATGTTTGGTGGACTTGCCAAGAGTGGACACTTGCGGCTACGATCAGGTGAGGCTTATACAATTGACTTAGAAGATGAACAACCACAATGGAGGCAACTAGAATATAGCGCATTCACGGGTTTAGCCAGTCAAAGTGCTGTTGTTCCTCCTCCTAGGCTGGATCATGTTGCTGTCAGCATGCCTTGTGGGAGGATCATTATATTTGGAGGTTCCATTGCTGGTCTTCACTCACCATCTCAGCTCTTTCTGTTGGACCCTTCTGAAGAGAAACCATCCTGGAGGATCCTCAATGTTCCAGGGCAACCACCTAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTGTTGGTGTTGGGTGGACACACTGGGGAGGAATGGATACTGAATGAGTTGCACGAGTTATGCTTGGCAAGTCGACATGACTCTGACCTGTGA 1899 0.465 MAMPKEKEDVQNSGKRLKCTRNEEEEKEQYEQVEADEEEEEEEDSELPLKLGLFFYPTIPTSFVVSDALEPDFPIIYVNKVFEIATGYRADEALGRNCRFLQYRDRRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRVRLTLIHDDDGTVTHVIGIQLFSEANIDLNRVSYPVFKETCNQDFDKNGKYTPKSGQSLYSQHQEMCSILQLSDEVLAHNILSRLTPRDVASIGSVCRRVRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKMGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDTGVLLSDTYLLDLTTDNPIWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRHDSDL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00448 632 MobiDBLite consensus disorder prediction 29 43 - -
Gma08g00448 632 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 10 629 - -
Gma08g00448 632 Pfam Kelch motif 537 584 IPR011498 GO:0005515
Gma08g00448 632 SUPERFAMILY F-box domain 211 273 IPR036047 GO:0005515
Gma08g00448 632 Pfam PAS domain 69 169 IPR000014 -
Gma08g00448 632 Pfam Galactose oxidase, central domain 313 363 - -
Gma08g00448 632 MobiDBLite consensus disorder prediction 1 43 - -
Gma08g00448 632 CDD PAS 59 169 IPR000014 -
Gma08g00448 632 Gene3D - 212 263 - -
Gma08g00448 632 SUPERFAMILY Galactose oxidase, central domain 300 617 IPR011043 -
Gma08g00448 632 TIGRFAM sensory_box: PAS domain S-box protein 74 169 IPR000014 -
Gma08g00448 632 MobiDBLite consensus disorder prediction 1 28 - -
Gma08g00448 632 Gene3D - 289 494 IPR015915 GO:0005515
Gma08g00448 632 Gene3D - 495 627 IPR015915 GO:0005515
Gma08g00448 632 PANTHER ADAGIO PROTEIN 3 10 629 - -
Gma08g00448 632 Coils Coil 20 43 - -
Gma08g00448 632 Gene3D PAS domain 56 181 - -
Gma08g00448 632 Pfam Galactose oxidase, central domain 427 478 - -
Gma08g00448 632 Pfam Galactose oxidase, central domain 378 425 - -
Gma08g00448 632 SUPERFAMILY PYP-like sensor domain (PAS domain) 70 170 IPR035965 -
Gma08g00448 632 Pfam F-box domain 219 256 IPR001810 GO:0005515
Gma08g00448 632 ProSiteProfiles PAS repeat profile. 75 130 IPR000014 -
Gma08g00448 632 SMART pac_2 134 175 IPR001610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00448 Gma-Chr8 3738685 3741812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00448 58 171 AGC Kinase Gene Family AT5G58140 42.982 5.40e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00448 K12116 - gmx:100812253 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02322 05 44182187 44185324 Gma08g00448 08 3738685 3741812 GST