Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00435 ATGGTGAGACCCTATGCAGCATACCCCATGACATGCAAGAAGAGGTGGCGAATGGCTTTGAATGCCATCTCTTTCGTCAAGACTCTTCACCATCTCTCCAACAAAGCTTTTCACATCAATACCCCAACCCAGCTCTTGCGCTCCTTCTCGTACCTTTCCATTGGCGTTGCTCCAGAAGAACCCTCCTTCAACAACGTTGATCCCAAACTTCTCAGCGATATGGTGAGGGAAAAAAGCAGCGAGTCTCTCACCCAACTTGGAGGCGTCAAAGAACTCGCCAAACTTCTTGAAACCGACGTGAAGCGTGGCATCAGAGACATTGATAACCGAAAACGTGTCTTCGGTGAAAACACGTTCACGAAACCTCCATCCAAAGGTTTTCTTTCTTTTGTCCTAGAATCTTTTAAAGATCCCACTATCATTATTCTTTTGGTTTGCGCTGTTCTTTCACTTGGCTTCGGCATCAAGCAACATGGCTGGAAGGATGGATGGTACGATGGAGGAAGCATCATACTGGCGGTTGTTCTCGTCATTGTTGTCTCTTCCGTCAGCAACTTCAACCAATCTAGACAATTCCAGAAGCTTTCAGCGAAAAGTGACAACTTAGGAGTGGAAGTGGTACGAGGTGGTAGACGCCAAAGGGTGTCAATCTTTGAGGTGGTGGTCGGTGACGTTGCTTACTTGAAGATCGGTGATCAGGTTCCAGCAGATGGGGTGTTTTTAGAGGGTCATTCGTTGAAGGTGGACGAGTCTAGCATGACGGGGGAGAGTGACCACGTGCATGTGAACGGTGACACGAACCCTTTCTTGTTATCTGGCACAAAGGTCACTGATGGTTTTGCACACATGCTTGTTACTTGTGTGGGTATGAACACTGCATGGGGTGCCATGATGGGTTCCATAACGAGAGAGGTCAATGAGGAGACACCTTTGCAGGTGCGTCTCAACAAATTGACTTCTGCTATTGGCAAGGTTGGTTTGTTTGTGGCTGCAATTGTTTTGGTGGTGTCTATGATACGGTACTTGACGGGAAGTACCAGAGATGACTTTGGGATCCGAGAATTTGTTCGGGGAAAGACTAAGTCTGAGGATGTCATGAATGCGGTTGTGGGGATTGTTGCTGCGGCTGTGACAATTGTGGTGGTGGCTATTCCAGAAGGGTTGCCATTGGCTGTTACTCTGAATTTGGCTTATTCCATGAAGAAAATGATGAGGGATAATGCCATGGTTCGGAGAATCTCTGCTTGTGAGACAATGGGGTCTGCTACAACAATCTGCACTGATAAAACAGGTACACTTACGTTGAATGAGATGAAGGTGACAGAGGTTTGGGTGGGGAAAAAGGAAATAGGAGGAGAAGATCGTTATTTGGCGCCAAGTTTAGTTCAATTATTGAAACAAGGGATTGGGTTGAATACCACTGCAAGTGTTTATCAGCCGCAACAAACCTCGCTGCCTGAAATTTCGGGCAGTCCTACTGAGAAAGCGTTGCTTTCTTGGGCGGTGGTGGATTTGGGGATGGACAATATTGATGAAGTGAAGCAGAATTGTGAGATAATTCATGTGGAGACGTTCAACTCTGCGAAAAAGAGAAGCGGGATTCTGATGAGGGAGAAGAGAGGGAATATGAATATGAATATTCATACACACTGGAAGGGAGCTGCTGAGATGATATTGGCTATGTGTTCAAATTATTATGACCATACAGGTGAAGTCATTGTCATGGATGATGGAGAAAGGGTTCAGATTGAGAACATTGTCAAGGGCATGGCAACCAAAAGTTTGAGATGCATTGCCTTTGCTCAAAAGAGCTGTGAAAAGCTTGAAGAGACGGGACTAACGTTGTTGGGGATACTTGGGTTGAAAGACCCTTGTAGGCCAGGAGTTGAAGCAGCAGTTGATTCCTGCAAGAATGCTGGAGTGAAGATCAAGATGATCACAGGAGATAATGTGCACACAGCAAGGGCCATAGCCTCTGAATGTGGGATTCTTTACCCTAATAATGATGAATTGGATGAAGAGGCAGTGGTTGAAGGGTTTCAATTCAGAAACTTCTCACACGAGGAGAGAATGGATAAGATTGACAGAATCAGAGTCATGGCTAGATCGTCTCCATTTGACAAGCTTCTGATGGTTCAATGCTTAAAGCAGAAGGGTCATGTGGTGGCAGTCACAGGTGATGGCACAAATGATGCACCTGCTCTCAAGGAAGCAGATATTGGACTTTCCATGGGAATACAAGGAACTGAAGTGGCAAAGGAGAGTTCAGATATTGTTATACTTGACGACAATTTCTCTTCTGTGGTTACCGTACTAAGGTGGGGAAGATGTGTGTACACAAACATACAAAAGTTCATTCAGTTTCAGCTCACGGTTAACGTTGCTGCACTTGTCATCAACTTTGTAGCTGCTGTTTCTTCTGGCAAAGTGCCTCTTTCAGCTGTCCAGCTTTTGTGGGTAAACCTGATAATGGACACTCTTGGAGCTTTGGCCTTGGCCACCGAGGAACCCACTAATGATCTCTTGAAGATGCCACCTGTAGGAAGAGTTGAGCCACTTATAACTAGAGTTATGTGGAGGAACCTCATTTCACAGGCATTGTATCAAGTGCTTGTCTTGCTGATCTTACAATTCAAGGGAAGATCAATCTTTGACGTCAGTGAGAAGGTGAAGAACACCCTTATTTTCAATGCCTTTGTCCTCTGCCAAGTCTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAACATCTTTGAGGGGCTTGGTAAAAATAAGTTGTTCGTGGCAATTGTGGGCCTAACTGTAATTCTTCAACTAGTGATGGTTGAGTTTTTGAAGAAGTTTGCCAATACTGAGAGGTTGACTTGGGAGCAATGGGGTGTTTGTGTTGGCATTGGAGCTTTGTCTTGGCCAATTGGTTTGCTGGTGAAGTGTATCTCAGTTGGTCCCAACAAGTAG 2961 0.4525 MVRPYAAYPMTCKKRWRMALNAISFVKTLHHLSNKAFHINTPTQLLRSFSYLSIGVAPEEPSFNNVDPKLLSDMVREKSSESLTQLGGVKELAKLLETDVKRGIRDIDNRKRVFGENTFTKPPSKGFLSFVLESFKDPTIIILLVCAVLSLGFGIKQHGWKDGWYDGGSIILAVVLVIVVSSVSNFNQSRQFQKLSAKSDNLGVEVVRGGRRQRVSIFEVVVGDVAYLKIGDQVPADGVFLEGHSLKVDESSMTGESDHVHVNGDTNPFLLSGTKVTDGFAHMLVTCVGMNTAWGAMMGSITREVNEETPLQVRLNKLTSAIGKVGLFVAAIVLVVSMIRYLTGSTRDDFGIREFVRGKTKSEDVMNAVVGIVAAAVTIVVVAIPEGLPLAVTLNLAYSMKKMMRDNAMVRRISACETMGSATTICTDKTGTLTLNEMKVTEVWVGKKEIGGEDRYLAPSLVQLLKQGIGLNTTASVYQPQQTSLPEISGSPTEKALLSWAVVDLGMDNIDEVKQNCEIIHVETFNSAKKRSGILMREKRGNMNMNIHTHWKGAAEMILAMCSNYYDHTGEVIVMDDGERVQIENIVKGMATKSLRCIAFAQKSCEKLEETGLTLLGILGLKDPCRPGVEAAVDSCKNAGVKIKMITGDNVHTARAIASECGILYPNNDELDEEAVVEGFQFRNFSHEERMDKIDRIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYTNIQKFIQFQLTVNVAALVINFVAAVSSGKVPLSAVQLLWVNLIMDTLGALALATEEPTNDLLKMPPVGRVEPLITRVMWRNLISQALYQVLVLLILQFKGRSIFDVSEKVKNTLIFNAFVLCQVFNEFNARKLEKKNIFEGLGKNKLFVAIVGLTVILQLVMVEFLKKFANTERLTWEQWGVCVGIGALSWPIGLLVKCISVGPNK 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00435 986 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 78 982 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma08g00435 986 PANTHER CALCIUM-TRANSPORTING ATPASE 12 973 - -
Gma08g00435 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Gma08g00435 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 980 IPR023298 -
Gma08g00435 986 SFLD C1.7: P-type atpase like 408 778 - -
Gma08g00435 986 SUPERFAMILY Calcium ATPase, transduction domain A 204 300 IPR008250 -
Gma08g00435 986 SFLD p-type atpase 408 778 IPR044492 -
Gma08g00435 986 SMART Cation_ATPase_N_a_2 82 155 IPR004014 -
Gma08g00435 986 Pfam Cation transporter/ATPase, N-terminus 87 150 IPR004014 -
Gma08g00435 986 PANTHER CATION TRANSPORTING ATPASE 12 973 - -
Gma08g00435 986 Pfam E1-E2 ATPase 204 405 - -
Gma08g00435 986 Pfam haloacid dehalogenase-like hydrolase 423 739 - -
Gma08g00435 986 PRINTS P-type cation-transporting ATPase superfamily signature 249 263 - -
Gma08g00435 986 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Gma08g00435 986 PRINTS P-type cation-transporting ATPase superfamily signature 617 628 - -
Gma08g00435 986 PRINTS P-type cation-transporting ATPase superfamily signature 639 649 - -
Gma08g00435 986 PRINTS P-type cation-transporting ATPase superfamily signature 725 744 - -
Gma08g00435 986 PRINTS P-type cation-transporting ATPase superfamily signature 749 761 - -
Gma08g00435 986 Gene3D - 133 973 - -
Gma08g00435 986 Gene3D - 423 770 IPR023214 -
Gma08g00435 986 Gene3D - 107 302 - -
Gma08g00435 986 PRINTS H+-transporting ATPase (proton pump) signature 583 601 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00435 986 PRINTS H+-transporting ATPase (proton pump) signature 725 741 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00435 986 PRINTS H+-transporting ATPase (proton pump) signature 757 782 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00435 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 696 805 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00435 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 370 452 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00435 986 Pfam Cation transporting ATPase, C-terminus 810 979 IPR006068 -
Gma08g00435 986 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 629 IPR023299 GO:0000166
Gma08g00435 986 Gene3D - 436 624 IPR023299 GO:0000166
Gma08g00435 986 SUPERFAMILY HAD-like 424 830 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00435 Gma-Chr8 3645159 3648119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00435 12 982 Primary Pumps ATPases AT3G63380 63.903 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00435 K01537 - gmx:100784119 1873.21