Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00432 ATGGCGACGCCGTTGGACGGAGGAGGAGTGGCAGTGCTCCCAAATTCCGTCAACAAGGTTGACTCCTCCTCGGCTCTCATTGGCGGCTTGAAGTGCTCCAAACCGGAGTCGCCAATTTTGATTTTCCTGTTCTTTCACAAAGCGATTCGGAATGAGCTTGACGCGCTGCACCGATTGGCCATCGCATTCGCCACCGGCAACCGCTCCGACATTAAGCCGCTCTCCGAGCGCTACCATTTCCTCAGCTCCATGTACAGGCACCACTGCAATGCTGAAGACGAGGTGATTTTTCCAGCTCTTGATATACGTGTGAAGAATGTAGCACAGACATATTCTCTCGAGCACAAGGGTGAAAGCAACCTTTTTGATCATCTATTTGAGCTTTTAAATTCTTCCATCAATAATGATGAAAGTTTTCCAAGAGAGTTGGCATCCTGCACAGGAGCTTTGCAGACGTCAGTTAGTCAACACATGGCAAAGGAAGAGGAGCAGGTATTTCCTCTGCTTATTGAGAAGTTTTCTCTTGAGGAACAGGCATCCTTAGTTTGGCAGTTTCTTTGCAGTATTCCTGTGAATATGATGGCCGAATTTCTACCATGGCTTTCAACATCTATATCACCTGATGAATCTCAGGATATGCAAAATTGCTTAATCAAGATAGTGCCACAGGAAAAACTCCTTCAGAAGGTCGTTTTCTCCTGGATGGAAGGAAGAAGTAGCATTAACACAATTGAAACTTGTGTAAATCATTCTCAAGTTCAATGTAGTTCTAGGTCATTAACCCATCAGGTTGAGAAAGTAAACTGTGCTTGTGAATCCACAACAACGGGAAAAAGGAAACATTCTGAATCTATGATAGATGTTTCTGATACCACTGGAACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAAAAAGAGTTAAGTGAGATAGCAGTGGAGGCCAGAAATATACAGCACTCTGGAGATTTTACTAATCTATCTGCTTTTAACGAAAGATTTCAATTCATAGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTTCAGCAGTAGATGGCGAATTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGTCAATTTAAAGACTTTCGGCACTTGATTGAAAGTATTCAAAGTGAAGGAGCATCATCTAATTCAGATGTTGAATTTTATTCCAAGTTATGCACACATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCATAATGAAGAAgttcagGTTCTTCCACTTGCAAGAAAGCACTTTAGCTTTAGAAGGCAATGTGAGCTTTTGTATCAAAGCTTATGCATGATGCCTCTGAAATTGATTGAGCGTGTCCTGCCATGGTTGGTAGGATCTTTAACTCAAGATGAAGCGAAGATGTTTCAGAGAAATATGCAGTTGGCAGCTCCAGCAACAGATTCTGCTCTTGTCACACTCTTCTGTGGATGGGCTTGCAAGGCTCGTAATGAAGGTCTGTGTTTGTCTTCAGGTGCATCAGGTTGTTGTCCTGCTCAAAGACTTTCAGATATTGAAGAAAACATTGGTTGGCCATCCTGTGCTTGTGCATCTGCATTATCTAATAGTCATGTATTAGCTGAATCAGGTGGGAACAATAGACCAGTCAAGAGAAACATATCGGAGTTGCACAAAAATGAAGATCTACCTGAAACTTCAGAGGCTGAAGATATTCAGAAACAATGTTGTAGTGCACGGCCTTGTTGTGTGCCAGGTTTAGGAGTAAGTAGTAACAATTTAGGGCTGAGTTCTCTTTCTACAGCCAAGTCCTTACGGTCCTTGTCTTTCAGCTCTTCTGCCCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGAGAGCAGCTCATGCAATGTTGGATCTACACAAAGACCAATTGATACCATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTGATGGTGATGAGACAATTCTTCGGCAATTTAATGGAAGATTTCGTCTTTTGTGGGGTTTGTATAGAGCTCATAGTAATGCTGAAGATGAGATAGTATTTCCAGCTTTAGAATCCAAAGAGGCACTTCATAATGTGAGTCATTCGTACATGCTGGACCATAAGCAGGAAGAACAATTGTTTGAGGATATTTCCTGTGTTCTTTCAGAGTTTTCTGTCCTTCATGAAGCCTTGCAGATGACCCATATGTCAGACAATTTAACTGAGAGTAATTTTGGAACCTCTGATGCTAATAATAGTGATGATATCAAAAAATATAATGAACTTGCTACTAAGCTTCAGGGGATGTGCAAATCCATAAGAGTCACCCTGGATCAGCATCTTTTCAGAGAAGAATGCGAACTGTGGCCATTGTTTGGGAGACATTTCACTGTAGAGGAACAAGACAAGATAGTGGGTCGGATAATTGGAACAACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTAACGTCTGCACTTACTCAGGATGAACAAAACAAAATGATGGATACATGGAAGCAGGCAACTAAGAACACTATGTTCAATGAATGGCTTAGTGAATGCTGGAAAGAGAGTCCAGTGTCTACAGCACAGACAGAAACATCAGATCATATCACTTCTCAGAGAGGTGCTGAATATCAAGAAAGCTTGGACCACAATGATCAGATGTTCAAGCCAGGTTGGAAAGACATATTTCGGATGAATCAGAATGAACTTGAGTCAGAGATCCGCAAGGTATATCGAGACTCAACTCTTGATCCAAGGAGAAAAGCATATCTTGTGCAGAATCTAATGACAAGTCGATGGATAGCTGCCCAGCAGAAATCACCTAAAGCTTTATCTGAAGGATCATCTAACAGTGTAGAAATAGAAGGACTCTCACCATCATTTCGGGACCCAGGGAAACATGTATTTGGGTGTGAGCACTATAAGAGAAATTGCAAGCTTCGGGCTGCATGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGACAATGTCCGCGATCACTCTATGGATAGAAAAGCAACATCAGAAATGATGTGTATGCGCTGCCTGAATATACAGCCAATAGGGCCCCTATGCATAACACCTTCATGTAATGGGTTTTCAATGGCAAAGTACTATTGCAATATATGCAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAATTTATGCCGTGTTGGACAAGGGCTTGGTATTGATTATTTTCATTGCATGAAGTGCAATTGTTGCCTGGGGATTAAATCATCATCTCATAAGTGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATTTGTTGTGATGACCTGTTCACTTCAAGTGCCACAGTCAGAGCTCTACCTTGTGGCCACTATATGCATTCTGCTTGCTTCCAGGCATACACGTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCCCTATTGGCTGCTGAGGAACTTCCTGAAGAGTACAAGGACCGGTGTCAGGACATACTCTGCCATGACTGTGATCGGAAGGGCACTTCACGCTTCCACTGGTTGTACCACAAATGTGGATTTTGTGGCTCTTACAATACCCGGGTTATCAAATGTGAGACGTCAAATTCCAGCTGCTCTTAG 3705 0.4157 MATPLDGGGVAVLPNSVNKVDSSSALIGGLKCSKPESPILIFLFFHKAIRNELDALHRLAIAFATGNRSDIKPLSERYHFLSSMYRHHCNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSINNDESFPRELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSTSISPDESQDMQNCLIKIVPQEKLLQKVVFSWMEGRSSINTIETCVNHSQVQCSSRSLTHQVEKVNCACESTTTGKRKHSESMIDVSDTTGTHPIDEILLWHNAIKKELSEIAVEARNIQHSGDFTNLSAFNERFQFIAEVCIFHSIAEDKVIFSAVDGEFSFFQEHAEEESQFKDFRHLIESIQSEGASSNSDVEFYSKLCTHADHIMETIQRHFHNEEVQVLPLARKHFSFRRQCELLYQSLCMMPLKLIERVLPWLVGSLTQDEAKMFQRNMQLAAPATDSALVTLFCGWACKARNEGLCLSSGASGCCPAQRLSDIEENIGWPSCACASALSNSHVLAESGGNNRPVKRNISELHKNEDLPETSEAEDIQKQCCSARPCCVPGLGVSSNNLGLSSLSTAKSLRSLSFSSSAPSLNSSLFIWETESSSCNVGSTQRPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFNGRFRLLWGLYRAHSNAEDEIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSEFSVLHEALQMTHMSDNLTESNFGTSDANNSDDIKKYNELATKLQGMCKSIRVTLDQHLFREECELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLSECWKESPVSTAQTETSDHITSQRGAEYQESLDHNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKSPKALSEGSSNSVEIEGLSPSFRDPGKHVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVRDHSMDRKATSEMMCMRCLNIQPIGPLCITPSCNGFSMAKYYCNICKFFDDERNVYHCPFCNLCRVGQGLGIDYFHCMKCNCCLGIKSSSHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYKDRCQDILCHDCDRKGTSRFHWLYHKCGFCGSYNTRVIKCETSNSSCS 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00432 1234 PANTHER CHY ZINC FINGER PROTEIN 24 1233 - -
Gma08g00432 1234 Pfam Ring finger domain 1117 1159 IPR001841 -
Gma08g00432 1234 Pfam CHY zinc finger 989 1064 IPR008913 GO:0008270
Gma08g00432 1234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1114 1162 IPR013083 -
Gma08g00432 1234 SMART ring_2 1118 1159 IPR001841 -
Gma08g00432 1234 CDD Hr-like 298 427 - -
Gma08g00432 1234 CDD RING-H2_Pirh2 1117 1160 - -
Gma08g00432 1234 SUPERFAMILY CHY zinc finger-like 984 1045 IPR037274 GO:0008270
Gma08g00432 1234 Gene3D nmb1532 protein domain like 36 187 - -
Gma08g00432 1234 Gene3D nmb1532 protein domain like 298 445 - -
Gma08g00432 1234 ProSiteProfiles Zinc finger RING-type profile. 1118 1160 IPR001841 -
Gma08g00432 1234 ProSiteProfiles Zinc finger CHY-type profile. 982 1051 IPR008913 GO:0008270
Gma08g00432 1234 SUPERFAMILY RING/U-box 1116 1163 - -
Gma08g00432 1234 SUPERFAMILY Zinc hairpin stack 1055 1111 IPR037275 -
Gma08g00432 1234 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 24 1233 - -
Gma08g00432 1234 CDD Hr-like 41 167 - -
Gma08g00432 1234 Gene3D - 1189 1230 - -
Gma08g00432 1234 Pfam Zinc-ribbon 1165 1222 IPR039512 -
Gma08g00432 1234 CDD Hr-like 644 804 - -
Gma08g00432 1234 ProSiteProfiles Zinc finger CTCHY-type profile. 1054 1117 IPR017921 -
Gma08g00432 1234 Pfam Hemerythrin HHE cation binding domain 642 805 IPR012312 -
Gma08g00432 1234 Pfam Hemerythrin HHE cation binding domain 295 429 IPR012312 -
Gma08g00432 1234 Pfam Hemerythrin HHE cation binding domain 43 169 IPR012312 -
Gma08g00432 1234 Gene3D nmb1532 protein domain like 638 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00432 Gma-Chr8 3616403 3628582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00432 37 1234 C2H2 Transcription Factor Family AT3G18290 68.740 0.0 1702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00432 K16276 - gmx:100803002 2520.35