Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00428 ATGTTCAAATTTGCATTTTTTTTTGCCTTTTTTCTTTTTTTCACTACTAATACTACCTCCGGAAGCCACAACAACACATCATCCTGTCCTACTAACAGCTGCAAAAATGGACCTAAGATCAGTTACCCATTTTGGTTTTCCCAAGGTTCCCTTCCTGATCAATATTGCGGTTACCAAGAACTTGGGCTTTTTTGTGATGACAATGGCAACGCTATTTTTTCTCCACCCCCAGGTAAATACTATTACGTAAAAGACATAGACTATGCAAACCATATACTTAAGCTCGTTGATTTTGACACTGCAAACATAACTTGTCCAAGGGCACTTCACAGCTTTCCCTTGGGCAACCTACCACTCTCTCACTCCCCTTTGAACTCAAACCTCAACTTTTACTACAACTGCACTCACTACCCTTCTTCTGGTGTGCCTCCTATCGAGTGTCTAAGTTCTGGGGCAAACCGGTCTTTTGTGTTTCTGATGGGGAACGAGACCGAAGGTTTCGACTGTCAGGAAAAAGTTGTGGTGGCAGTGTTGAAGGATCAGATCACAAGTCATGATGATGGCGGCTTGATCAACGAGTTTGCTGGGGCCATGAATGAAGGCTTCTTGCTTGATTGGCAAACAACTACGAATTGCGCCGAGTGCGAGGCTAGTAATGGAACTTGTGGTTACAGTAACACCAGGAAGGAGACGCTGTGCTTTTGCAAGGATGGCACCACAAAAAGCAATACATGTCAAGGGGGAGGGGGAAGCAGAACCGGTTTGTCAAGGTTAATTATAGGTTTAATAATAGGTGGAGGAATTGGTGCACTGCTGATATGCATCCTAGTTTACAGTTTTAGACGAAAATTATCACCAATTGTGTCAGAAATCCGGAAGGTCAAAAAGATTCATCAAGACATTGAGGCCCTCATAAGAAGTAATGGACCTCTTCCCATAAAAAGATATTCATATTCAGAGATAAAGAAAATGACCAATTCTTTTCAATCCAAACTGGGACAAGGTGGCTATGGTCAAGTATATAAAGGAAATCTAAGCAACAACTCTCCTGTGGCAGTGAAGGTACTGAATGCTTCCAAAGGGAACGGGGAAGAATTTATGAACGAAGTTATAAGCATCAGTAGAACGTCCCATGTAAATATTGTTAATCTCCTTGGTTTTTGTCTTGAAGGCCAGAAGAAAGCACTTGTCTACGATTACATGCCCAATGGATCCCTTGAAAAGTTTATACACAACAAGAATTTGGAAACCAATCCACCTTTGAGTTGGGAAAGATTACACCACATTGCTGAAGGGATAGCTAAAGGACTGGAGTACTTGCATAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATCCTTTTGGACAAAAAGTTCTGTCCCAAAATCTCTGATTTTGGGATGGCTAAGCTCTGCTCAAATACACAAAGTATCATATCTATGTATGGTGCTAGAGGGACAGTTGGGTATATAGCTCCAGAAGTGTGGAACAGAAACTTTGGAGGGGTGTCATATAAGTCTGATGTCTATAGTTATGGAATGATGATTTTGGAAATGGTCGGAGGAAGGCAAAGTATCAGTATTGAAGCAAGTCATTCAAGTGAGACATATTTTCCTGATTGGATATACAAGCATGTTGAGTTGGGAAGCAATTTAGCATGGGATGAAGGTATGACCACAGATGAAAATGAAATTTGTAAGAAAATGATTATTGTGGGATTGTGGTGCATACAAACAATCCCATCTGACAGGCCTGCTATGAGTAAGGTGGTTGAAATGTTAGAAGGAAGCATAGATCAGTTGCAAATTCCACCAAAGCCATTCATATTTAGTCCTACCAAAACCCAAGTGGATATTTGCACCACTACTAGTAGCTCTGATTGA 1899 0.4102 MFKFAFFFAFFLFFTTNTTSGSHNNTSSCPTNSCKNGPKISYPFWFSQGSLPDQYCGYQELGLFCDDNGNAIFSPPPGKYYYVKDIDYANHILKLVDFDTANITCPRALHSFPLGNLPLSHSPLNSNLNFYYNCTHYPSSGVPPIECLSSGANRSFVFLMGNETEGFDCQEKVVVAVLKDQITSHDDGGLINEFAGAMNEGFLLDWQTTTNCAECEASNGTCGYSNTRKETLCFCKDGTTKSNTCQGGGGSRTGLSRLIIGLIIGGGIGALLICILVYSFRRKLSPIVSEIRKVKKIHQDIEALIRSNGPLPIKRYSYSEIKKMTNSFQSKLGQGGYGQVYKGNLSNNSPVAVKVLNASKGNGEEFMNEVISISRTSHVNIVNLLGFCLEGQKKALVYDYMPNGSLEKFIHNKNLETNPPLSWERLHHIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKKFCPKISDFGMAKLCSNTQSIISMYGARGTVGYIAPEVWNRNFGGVSYKSDVYSYGMMILEMVGGRQSISIEASHSSETYFPDWIYKHVELGSNLAWDEGMTTDENEICKKMIIVGLWCIQTIPSDRPAMSKVVEMLEGSIDQLQIPPKPFIFSPTKTQVDICTTTSSSD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00428 632 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Gma08g00428 632 Gene3D Phosphorylase Kinase; domain 1 303 400 - -
Gma08g00428 632 CDD STKc_IRAK 332 601 - -
Gma08g00428 632 Gene3D Transferase(Phosphotransferase) domain 1 401 608 - -
Gma08g00428 632 SMART serkin_6 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00428 632 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 630 IPR045874 GO:0004672
Gma08g00428 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Gma08g00428 632 Pfam Wall-associated receptor kinase galacturonan-binding 29 97 IPR025287 GO:0030247
Gma08g00428 632 Pfam Wall-associated receptor kinase C-terminal 151 238 IPR032872 -
Gma08g00428 632 SUPERFAMILY Protein kinase-like (PK-like) 307 600 IPR011009 -
Gma08g00428 632 Pfam Protein tyrosine and serine/threonine kinase 328 599 IPR001245 GO:0004672|GO:0006468
Gma08g00428 632 PANTHER - 12 630 - -
Gma08g00428 632 ProSiteProfiles Protein kinase domain profile. 326 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00428 Gma-Chr8 3583663 3586161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00428 30 614 Receptor kinase-like Gene Family AT5G38260 39.280 1.45e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma08g00428 PK_Tyr_Ser-Thr 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00428 - - gmx:100781977 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00857 07 9099518 9104821 Gma08g00428 08 3583663 3586161 PCT