Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00423 atgagaacccaacgtcttaaccatctccttctctccctcttcctcttcGCAGCCGCATTCTCCAGCCTTCACCCGACGGCCACCGCCGGAGACGAAGGCGCACCCTCCCCAGGCGACGGCGACGGCGACGCCGATTTCATACGCACTAGCTGCAACACCACGCTCTACCCGGACGTGTGCTTCACCTCCCTCTCTCGCTACGCCAGTGCGGTGCAACAGAACCCCGGCCAGCTGGCGCGCGTTGCCATCTCCGTGAGCCTCTCCAAGGTCCACCGCGCCGCCTCCTACGTCTCCAACCTCACGCGCGACGCCGACTACGACGGCACCACGCGCGCCGCCCTCGCTCTCCACGACTGCTTCTCGAACCTCGGCGACGCCGTGGACGAAATCCGCGGCTCGCTGAAGCAGATGCGTCAGATTGGAGCCGCCGGCGCCGGCGCCAGCTCGTTCCTGTTTCAGATGAGCAACGTGCAGACCTGGATGAGCGCTGCACTCACCGACGAAGAAACCTGTACGGACGGCTTCCAGGACGTAGCGGACTGTCCCGTGAAAACGGATGTATGCGATCGCGTCACCAACGTCAAGAAGTTCACCAGCAATGCCTTGGCGCTCGTCAACTCCTACGCTAACAAGGGAATGCCTTGA 645 0.5938 MRTQRLNHLLLSLFLFAAAFSSLHPTATAGDEGAPSPGDGDGDADFIRTSCNTTLYPDVCFTSLSRYASAVQQNPGQLARVAISVSLSKVHRAASYVSNLTRDADYDGTTRAALALHDCFSNLGDAVDEIRGSLKQMRQIGAAGAGASSFLFQMSNVQTWMSAALTDEETCTDGFQDVADCPVKTDVCDRVTNVKKFTSNALALVNSYANKGMP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00423 214 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
Gma08g00423 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 208 IPR006501 GO:0004857
Gma08g00423 214 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 211 - -
Gma08g00423 214 CDD PMEI-like_3 49 210 - -
Gma08g00423 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 211 - -
Gma08g00423 214 SMART PMEI_2 42 204 IPR006501 GO:0004857
Gma08g00423 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 208 IPR035513 -
Gma08g00423 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00423 Gma-Chr8 3526291 3527437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00423 46 207 Carbohydrate Esterase AT1G53830 26.829 2.29e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00423 - - gmx:100812251 387.111