Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00413 ATGGAGAGAGATTTCATGGGTCTCAACTCAAAAGAACCTCTTGCTGTGGTGAAGGAGGAGATGCACGTTTATGGCTTCGAAGACTCTGGCTTCACAAAGGGTCGGATTGCACAGTGGCCATTCTCGAACAAAGTATCTGCCCTTCCACATTTGATGTCTTTCAAGGCTTCTCAAGATGATAAGACTAAGAAGATAGTGTCTGATCCCTTAACATCTGCAGGGTTTATGTCTATCTTAAGTCAAGAAGCATTTGACTCTAGTCAGAAACGCTGTGCTGGTGAACCCCAGAAGTCTTTCAATCACGATGGGCAAGGTCGCCTTCATTTTTCGCTGACTCCATATCCTGTACAACATGATGTGAACTCTGTGAATCGTCCTCATGATGTGAAGATGCTTTCAGTTCCCAATCAAGCAATTTCACTTTCCTTGGGGAATCCATTCCTGAAGAATGATTTTGCAACTGCTGGTCAGAAGCTGTTACTTGGGGGAATACCTGTTACCACGCCTCATTCTGTTCTTCCCTCTGCTGTTGCTGTTGCTGGAATGACCGAATCATGTAACACTGTGAAACCATCTGCGCCTTCTGCTCAACTTACCATCTTCTATGCTGGTACTGTCAATGTCTTTGATGATATCTCCGCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGGCAATAGCTTATCTGCAGGTTCTAACATGGCACAGCCAAAAGTTCAGGTGCTTGTCTCGAAGTTGGCTGTTGGTGATGGTGTGCCTGTGAGTCAACCTGCAAATACATCACCTGGCTCTGGTCTTTCAAGTCCTTTATCTGTTTCTTCACATACCGGCATACAGTCAGGGAGTGGCTCAACTAGTACTGATAAAACAACTGGAGTTCCCACCACTCCTGTTTGCAATGTGGAGCCTCCAAAGATAGTCAGTGCAACCACTATGTTGACATCAGCTGTACCTCAGGCCCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAACGCAAAGAAAGGGTGATGAGTGCAGCACCATACAACCTCGACAAGAAAGTCTGA 1047 0.4565 MERDFMGLNSKEPLAVVKEEMHVYGFEDSGFTKGRIAQWPFSNKVSALPHLMSFKASQDDKTKKIVSDPLTSAGFMSILSQEAFDSSQKRCAGEPQKSFNHDGQGRLHFSLTPYPVQHDVNSVNRPHDVKMLSVPNQAISLSLGNPFLKNDFATAGQKLLLGGIPVTTPHSVLPSAVAVAGMTESCNTVKPSAPSAQLTIFYAGTVNVFDDISAEKAQAIMLLAGNSLSAGSNMAQPKVQVLVSKLAVGDGVPVSQPANTSPGSGLSSPLSVSSHTGIQSGSGSTSTDKTTGVPTTPVCNVEPPKIVSATTMLTSAVPQARKASLARFLEKRKERVMSAAPYNLDKKV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00413 348 Pfam Jas motif 318 342 IPR018467 -
Gma08g00413 348 ProSiteProfiles Tify domain profile. 191 226 IPR010399 -
Gma08g00413 348 PANTHER PROTEIN TIFY 7 13 347 - -
Gma08g00413 348 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 347 IPR040390 -
Gma08g00413 348 MobiDBLite consensus disorder prediction 254 301 - -
Gma08g00413 348 SMART tify_2 191 226 IPR010399 -
Gma08g00413 348 Pfam tify domain 193 225 IPR010399 -
Gma08g00413 348 MobiDBLite consensus disorder prediction 254 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00413 Gma-Chr8 3475981 3479763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00413 38 347 Tify Gene Family AT3G17860 35.185 9.97e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma08g00413 tify 5.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00413 K13464 - gmx:100787821 653.284