Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00396 ATGAATTCCCCACCTGATGACAACAGTTCAGAACCTACAGAGTTGGGCAGCCCAGATGCTAGTTCCAATGAAAATGGGAATTTTCTATCCTGCTATGGTGAGGTGGAAGCCAAACATCGATTGCTCTTGGTTCAGTGGTTAACTTGTCTTGTCCCTTCATTGAACCTTCCAATAAATGTCACGGATGGTGAATTAAGAGCATGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTGAACAAGATACGACATGGTACCGTGATTGTGGTTAGTGAACCTGATAATTTTCTACCATCACAATCAGAAAATGTTAAAACGTTTCTGAAAGCTTTGGATGGAATGGGACTGCCCCGGTTTGAAATATCCGACCTAGAGAAGGGGTCTATGAAAGCTGTTGTGGATTGTCTTTTAACACTTAGAGAGAAAAGTTTGCAGAATGCTTTGGGAGATAATATTTCTGTAACTAATTCCAACATTGTGAGCCCTCATGGGAATACACCACTAAGTTTTCATTGTTCTCCAACATTTGGTGGAGAGCAGAGGAAAATTGCAGCTGGGTCGATGTTGCAACGTGTTAAGAGTTCCCCAGTTATGGCAGAATCATCAGCTTCATTAATACACCATGTTGGTCATAACTTTCATGAGGTGTTTCAAATGAAACCTGGGAGTTACGCAGATCTTCCTGCTGCAAAAATAGCAGAAATGATGAAATCAAACAGTATAGATAATGCTCCCACTCAGTCGCTTCTGAGTGTTGTGAATGGTATTCTTGAAGAAAGTGTTGAAAGAAGAAATGGGGAAATACCTCATcgtgtggcttgcttgttgaaaaaggttactcaagagattgagcggcgcatgtcaactcaagcagaacatttgcgaactcaaaacaatcttttcaaggctcgagaagaaaaataccaatcgagaataagagtactcgaggcacttgcatctggaactatagatgagagtgaggtatcacaaataGTTGAGGAGATCAGAGAGGAAGAAAAAAAGGCAGATGAAAAAGAAATCATTAGGTTGATGAAAGAGCAGGAGGACAAAAATTTGGAAATTTCATCATTGAAGCAAGACCTAGAAGCAACTAAAAAAACAAATGAAGTACAGTGCTCACAGTTGGAAGGAGAAGCTAAGGGTGCTAAAGCAGAACTGGAACAAAAGTCTCAAGAATATGAGCATCAATTGGAAGAACTAAGAAATAAGGTTAAGGAGCTTGAGGTTTCTTCTGATTCAAAAGATCAGAAGTGGAACATGAAAATGAACCAAATGCAGACAGTTATAAAATTTCAATTCAGTTCCCTACAGAAATTGAAATTATCTTGGGAGTCCATTAAGCACAATGTTATGAAAGAGCAAACGGTTTATGCAGAGGATTGTGATCGGTTAGGTGTTTATCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGCTGTTCTTGCTGAAAATCGAAAAATGTTTAATGAGATTCAAGAATTAAAAGGAAATATCAGAGTATTTTGTCGAATTAGACCATTTCTTTCAGGCAAAAAGGATAAACAATCTATTGTTGAACTCATTGGTGAAAATGATTTGGTTGTGGCAAATCCATCCAAAGAAGGAAAAGATGCTCTTCGATCTTTTAAATTTAACAAGGTTTTCGGCTCTGCCACAACTCAAGCGGAGGTATACTCTGACATTCAATCCTTTATAAGATCAGTTCTAGATGGATATAATGTGTGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTATACGATGACTGGTCCAAATGGGGCAACAAGCGAGACTATTGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAAGATTGCCACAAGTAGAGAAAGCTTCATAGACTATGAGATTGGAGTTCAGATGGGCTTAGCAGTACCAGATGCTAGCTTGTTCCCTGTGAAATCACCTTCAGACGTGATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTCTCTCAATTCATATTTGTGGAAAGGACTTGAAGATTGGTTCCACAATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGGTCTGAAGTAATTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAAAGCCCCCATGTACCATACAGAAACAGCAAACTTACTCAACTTCTACAAACTTCTCTTGGTGGCCAAGCAAAGACACTCATGTTTGTCCAAATTAATTCAGACATAAGTTCATATTCTGAAACACTGAGCACTTTAAAGTTTGCTGAAAGGGTTTCTGGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGAAGTCAGAGAATTAATGGAACAGGTGTCTTCTTTGAAGAACGCTATTTCTGCAAAAGAGGAGGAGATTCAGAGGCTTCAATTACTCAAAGGTTCAGTCGGTAGCATTGTTTGGCGAAACCAAATTCCACGAAGTAGAAGTATTAAGCACTACGAAGCTGATAACCAGCAACCGATGGATGATCACATACATCAAAGTGAATCTCTTCATCAATCTGAACTTAATGGGGGAAATATAGGAAAGAAAGTTGCTGCAAATGCAGAAACTTCGGGATTTACAGATTCTGATTTTGATGGAAAATCAAGTGATCTTTCTGACAGTAGTGTTGCTCCAGGCACAGAAACTGATGGTTCTGAAAATTCCAGTCTCACCGAAGGCAAAAAATCATCAGACAAGAGATCTAAAGCAATTCGTAAAACTGTTCAAGTGATGAGGAAATTAAGCCGAACTTCATCTACGGCGACCACCCCAGTAAAGGACGACCCCGTGAAGAAGTCACCAGGTATTAAAAAGAGCGTCAGTATAGGCAACCTTAAACCTCCAAAACTGTGGAAGTAA 3000 0.3697 MNSPPDDNSSEPTELGSPDASSNENGNFLSCYGEVEAKHRLLLVQWLTCLVPSLNLPINVTDGELRACLSNGTVLCQILNKIRHGTVIVVSEPDNFLPSQSENVKTFLKALDGMGLPRFEISDLEKGSMKAVVDCLLTLREKSLQNALGDNISVTNSNIVSPHGNTPLSFHCSPTFGGEQRKIAAGSMLQRVKSSPVMAESSASLIHHVGHNFHEVFQMKPGSYADLPAAKIAEMMKSNSIDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLKKVTQEIERRMSTQAEHLRTQNNLFKAREEKYQSRIRVLEALASGTIDESEVSQIVEEIREEEKKADEKEIIRLMKEQEDKNLEISSLKQDLEATKKTNEVQCSQLEGEAKGAKAELEQKSQEYEHQLEELRNKVKELEVSSDSKDQKWNMKMNQMQTVIKFQFSSLQKLKLSWESIKHNVMKEQTVYAEDCDRLGVYLKPLLHAAENYHAVLAENRKMFNEIQELKGNIRVFCRIRPFLSGKKDKQSIVELIGENDLVVANPSKEGKDALRSFKFNKVFGSATTQAEVYSDIQSFIRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFKIATSRESFIDYEIGVQMGLAVPDASLFPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVLSIHICGKDLKIGSTMVGNLHLVDLAGSERVDRSEVIGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDISSYSETLSTLKFAERVSGVELGAARSSKESKEVRELMEQVSSLKNAISAKEEEIQRLQLLKGSVGSIVWRNQIPRSRSIKHYEADNQQPMDDHIHQSESLHQSELNGGNIGKKVAANAETSGFTDSDFDGKSSDLSDSSVAPGTETDGSENSSLTEGKKSSDKRSKAIRKTVQVMRKLSRTSSTATTPVKDDPVKKSPGIKKSVSIGNLKPPKLWK 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00396 999 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 2 343 - -
Gma08g00396 999 SMART ch_5 39 142 IPR001715 GO:0005515
Gma08g00396 999 ProSiteProfiles Kinesin motor domain profile. 505 802 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 MobiDBLite consensus disorder prediction 904 999 - -
Gma08g00396 999 Gene3D Kinesin motor domain 448 637 IPR036961 -
Gma08g00396 999 Gene3D - 32 145 IPR036872 -
Gma08g00396 999 Gene3D Kinesin motor domain 638 843 IPR036961 -
Gma08g00396 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 840 IPR027417 -
Gma08g00396 999 MobiDBLite consensus disorder prediction 1 23 - -
Gma08g00396 999 Pfam Kinesin motor domain 639 800 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 Coils Coil 351 424 - -
Gma08g00396 999 Pfam Microtubule binding 491 638 IPR031852 GO:0008017
Gma08g00396 999 MobiDBLite consensus disorder prediction 958 973 - -
Gma08g00396 999 Gene3D - 342 383 - -
Gma08g00396 999 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 639 999 - -
Gma08g00396 999 PANTHER KINESIN-LIKE PROTEIN KLP-3 639 999 - -
Gma08g00396 999 Pfam Calponin homology (CH) domain 43 141 IPR001715 GO:0005515
Gma08g00396 999 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 343 - -
Gma08g00396 999 PANTHER KINESIN-LIKE PROTEIN KLP-3 355 638 - -
Gma08g00396 999 ProSiteProfiles Calponin homology (CH) domain profile. 37 144 IPR001715 GO:0005515
Gma08g00396 999 MobiDBLite consensus disorder prediction 904 938 - -
Gma08g00396 999 PRINTS Kinesin heavy chain signature 752 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 PRINTS Kinesin heavy chain signature 579 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 PRINTS Kinesin heavy chain signature 672 689 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 PRINTS Kinesin heavy chain signature 703 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 Coils Coil 809 843 - -
Gma08g00396 999 SUPERFAMILY Calponin-homology domain, CH-domain 40 143 IPR036872 -
Gma08g00396 999 Coils Coil 328 348 - -
Gma08g00396 999 SMART kinesin_4 503 810 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g00396 999 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 355 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00396 Gma-Chr8 3336653 3345121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00396 493 836 Calmodulin-binding Proteins AT5G65930 37.135 1.00e-60 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00396 K10406 - gmx:100819914 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00396 08 3336653 3345121 Gma08g00396 08 3336653 3345121 ECH
Gma05g02272 05 43755437 43764106 Gma08g00396 08 3336653 3345121 GST
Gma08g00396 08 3336653 3345121 Gma09g01705 09 42697473 42702630 PCT
Gma09g01705 09 42697473 42702630 Gma08g00396 08 3336653 3345121 PCT