Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00388 ATGACCATTCAAAATTGTTCTTCTTCGGCTTCCATATCAACGTCGGATTCGAAGGAGAAGAAGAAGGAAGCAGCTTCACCTTGGTTAATTGTTGGCCTCGGCAATCCAGGCAAAAAGTACGCTGCCACCCGCCACAATGTGGGTTTTGAGATGGTTGATACCATTGCTGAAGCTGAAGGGATATCTATGACCACTGTTTCCTTCAAAGCCTTATTTGGAAAAGGTTTTATAGGTGATGTACCAGTTATACTTGCAAAACCACAGACTTTTATGAATTTAAGTGGCGAATCTGTTGGGACCATAGTTTCATATTACAAGATTCCAGTGAAGCAAGTACTTGTGATCGTTGACGACTTGGATTTGCCTTTTGCTAAATTGCAGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGAATGAAGAGTGTTATTAATCACTTCAAAGGGAATACTGGTTTTCCCCGTTTAAGAATTGGCATTGGGCGACCTCCTGGGAAAATGGACCCTGTAGCTTTTGTTCTTCACACCTTCACTAAACAGAAAGGCAAGAGTTGA 555 0.4234 MTIQNCSSSASISTSDSKEKKKEAASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKALFGKGFIGDVPVILAKPQTFMNLSGESVGTIVSYYKIPVKQVLVIVDDLDLPFAKLQLLPKGGHGGHNGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLHTFTKQKGKS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00388 184 SUPERFAMILY Peptidyl-tRNA hydrolase-like 27 181 IPR036416 GO:0004045
Gma08g00388 184 TIGRFAM pth: aminoacyl-tRNA hydrolase 29 181 IPR001328 GO:0004045
Gma08g00388 184 PANTHER PEPTIDYL-TRNA HYDROLASE 7 181 IPR001328 GO:0004045
Gma08g00388 184 Hamap Peptidyl-tRNA hydrolase [pth]. 27 181 IPR001328 GO:0004045
Gma08g00388 184 Pfam Peptidyl-tRNA hydrolase 29 181 IPR001328 GO:0004045
Gma08g00388 184 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 133 143 IPR018171 GO:0004045
Gma08g00388 184 Gene3D - 12 184 IPR036416 GO:0004045
Gma08g00388 184 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 7 181 - -
Gma08g00388 184 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 40 53 IPR018171 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00388 Gma-Chr8 3251629 3254081 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00388 K01056 - gmx:100526866 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00388 08 3251629 3254081 Gma08g00388 08 3251629 3254081 ECH
Gma05g02264 05 43678070 43686646 Gma08g00388 08 3251629 3254081 GST