Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00379 ATGGCAAGTCGACTGAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTCAAACTCACACCAAATCGAAGATGCATTAACTGTAACAGCTTGGGACCACAATATGTTTGCTCAAATTTCTGGACGTTTGTTTGCATTAACTGTAGCGGAATACACCGAGAATTTACACATCGGGTAAAATCAGTTTCAATGGCTAAATTTAGTGCACAGGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCACAGGAAATCTATCTTAAAGAATGGGATCCACAACGTCATTCTTTGCCTGATAGCAGCAATGTTGACAAGCTCCGGGACTTTATTAAGAATGTTTATGTGGATAGAAGATTCAGCGGTGAGAGGACCTATGACAAACCTCCAAGAGTAAAGGGTGACAAGGATGATTTCCACGAAAACATGAGAACAAAAACGTATCAGGGAAGCCCTTCATATGAGGACACACATGAACGTCGTTACAGTGACAGGTCTAGTCCTAGTGGAAGAAGTCCCGGATATGATCAAGAAAACAGGCAATATGGTGATTACAAAAAAAGCCCTGTTCGTCCTCCAATAATCAATGATTGGCGTCGAGAAGATAGATTTGGGGATGGACGGAAATTTGAAGATCATAGAATATCTGATGGAAATCATAATGTGGAAAGAGCTTCTCCTGAGCGAGCCAAGGATCTGGATTCTTCCAGCCCACCTGTGGTCCGACCTGTTAGAGAGATCTTGGGAGAAAATGTAGTACCTCTTCGAATAAGTGAACCACCCAAAACAAACAGTGGACAGGCTGCTAATGGCTCAGCACTCACACAGAGAACTGCATCTTCCAGTAGCTTAGCATCCAGCAATGGAACCCCTGCAGAAGTTAAGCTTGAGACTATTAAGAGCCTTATTGATTTTGATGATGATCCTGAACCACCTGTTGCTTCAGCAGCTCCTCAAGCCCAGCAAACTACTGTGGCTCAACATGGGATGCCTGCAAATTCCAATGATAATAATTGGGCCTCTTTTGATGTTGCTCCCGAGGCAAAAGCACCTCAGGGTCCTTCGAATGTAAATCCACTTGAATCCATGCTGACACAATTGTCAGTACCAGTATCTTTACCTTCTCATGTTTCAGGAGCCCAAGGACTTGTGATGGGATCAGCTCTTACCGCTACTGCTGCAGGAACACCAATTATTAGCAGCTTCTCAACATTCCCAGCCAGTGGTGCTTCAGTAACATCTTTTGGATTAACACCAGCATCAACTCACAATAATGCAGGACAGTGGGCTACTTTGCAGTATCAGCAACAACAACCTTTGTTCACTGCTGCTGCTAGTCAGCCTACTATTCAACAATCCACATCACCAGTTGGTGGAGCTTTGAATAATCAGCCCTGGACTGTACCACTGGTACAAGGGAACCCAAGCACACCAATGCCTCATACATCACACCTCGTCCCAAAGCCTGCCAATGAGGCTAAATCCCGTGTTGTTTTACAACCTTCTACAGCAGACATAAAACCAAGTGGAAGAAGTGAGCTTCCAGAGGATCTATTCACTGTAAAATATTCACCGTTCCCTGCTCCAGTCCCAGGTTGGCAAATGGGTCCACCACCTAGCATGGGTATCTCAATTCAATACAATAATGTGGTGCCCATGCCAAATTATGCACAACCATCAAAATCAACAAATCCATTTGATGTCAGTAACGAACCAACTCCAGTTCAAGCCTCAACATTTCCTTCCATGTCATCTTTGCAAGGTGCTCTGCCTAGTGTAACACCTTCAGCTACAATGCACCCGTCAAACATGGGTAATATATCTCATGCTTGGAATCCACCCTCATCATCATCTTATGTATCGCCTCCTCAAGTACAAACTCTTGCACCAGCAATGGGACCAGGGGCATACATGGGACAACAAATGGCAACTAACATGCCAATGCCAAGGCATCAAGGAATTGGGAGTTTTGCTACTGAGGCAACTGCTTTTGGGTTCTCAAATCCAGATCAACAGCTGACTGGTAGGTTGTCAACTGCTGCTACCCCAAACCCCTACCATGCAGGAGGGAACCCTTTCGGATGA 2091 0.4467 MASRLKEDEKNERIIRGLLKLTPNRRCINCNSLGPQYVCSNFWTFVCINCSGIHREFTHRVKSVSMAKFSAQEVSALQEGGNQRAQEIYLKEWDPQRHSLPDSSNVDKLRDFIKNVYVDRRFSGERTYDKPPRVKGDKDDFHENMRTKTYQGSPSYEDTHERRYSDRSSPSGRSPGYDQENRQYGDYKKSPVRPPIINDWRREDRFGDGRKFEDHRISDGNHNVERASPERAKDLDSSSPPVVRPVREILGENVVPLRISEPPKTNSGQAANGSALTQRTASSSSLASSNGTPAEVKLETIKSLIDFDDDPEPPVASAAPQAQQTTVAQHGMPANSNDNNWASFDVAPEAKAPQGPSNVNPLESMLTQLSVPVSLPSHVSGAQGLVMGSALTATAAGTPIISSFSTFPASGASVTSFGLTPASTHNNAGQWATLQYQQQQPLFTAAASQPTIQQSTSPVGGALNNQPWTVPLVQGNPSTPMPHTSHLVPKPANEAKSRVVLQPSTADIKPSGRSELPEDLFTVKYSPFPAPVPGWQMGPPPSMGISIQYNNVVPMPNYAQPSKSTNPFDVSNEPTPVQASTFPSMSSLQGALPSVTPSATMHPSNMGNISHAWNPPSSSSYVSPPQVQTLAPAMGPGAYMGQQMATNMPMPRHQGIGSFATEATAFGFSNPDQQLTGRLSTAATPNPYHAGGNPFG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00379 696 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Gma08g00379 696 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Gma08g00379 696 MobiDBLite consensus disorder prediction 306 342 - -
Gma08g00379 696 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Gma08g00379 696 CDD ArfGap_AGFG 12 122 - -
Gma08g00379 696 MobiDBLite consensus disorder prediction 318 342 - -
Gma08g00379 696 PANTHER ARF GTPASE ACTIVATOR 1 696 - -
Gma08g00379 696 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Gma08g00379 696 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Gma08g00379 696 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Gma08g00379 696 MobiDBLite consensus disorder prediction 124 146 - -
Gma08g00379 696 PANTHER ARFGAP/RECO-RELATED 1 696 IPR044820 GO:0005096
Gma08g00379 696 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Gma08g00379 696 MobiDBLite consensus disorder prediction 260 294 - -
Gma08g00379 696 MobiDBLite consensus disorder prediction 124 294 - -
Gma08g00379 696 MobiDBLite consensus disorder prediction 195 233 - -
Gma08g00379 696 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00379 Gma-Chr8 3184226 3193021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00379 12 122 C2H2 Transcription Factor Family AT4G21160 34.188 1.14e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00379 - - gmx:100815114 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00379 08 3184226 3193021 Gma08g00379 08 3184226 3193021 ECH
Gma05g02258 05 43609431 43622276 Gma08g00379 08 3184226 3193021 GST