Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00377 ATGATGATGATGAAGAAGAAGGACGCAGCAtactcctccattctcacactactcctcattgccacactactcTCCCTAACCGTGTCTGCCTCTTCACTCTCCGACGCCGAAGCAATGTACGTCAAACAACGCCAGCTTCTCTACTACCGAGACGAGTTCGGCGACCGAGGTGAGAATGTCATCGTTGACCCTTCTCTTGCTTTCGAAAATGACCGTCTCAGAAACGCTTATATAGCCTTGCAAGCTTGGAAGCAAGCCATTTTGTCTGATCCCCGTAACCAGACAGCCGATTGGGTTGGATCCGATGTGTGCAGTTACACCGGAGTTTACTGTGCTCCCGCTCTGGACATCCCCAAGATCCGTACCGTTGCCGGCATTGATCTCAATCATTGCGACATTGCCGGTTATTTACCCGAAGAGCTTGGCTTGCTTCTGGATCTTGCACTCTTCCACGTCAACTCCAATAGATTCTGCGGCACCGTGCCGCACAAGTTCGAGAGGTTGAAACTGCTCTACGAACTGGATCTCAGTAACAACAGATTCGCAGGGAACTTCCCTGAGGTAGTTCTGCGTCTTCCATCACTCAAGTTCCTGGATCTCAGGTTCAACGAATTCGAAGGAACGGTGCCGAGAGAGTTGTTCGATAAGGATCTGGACGCCATTTTCATCAACGACAACCGTTTCGTATTTGATCTTCCGGACAACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCCAACAACAGGTTCCACGGCTGCATTCCGGCGAGCTTGGGGAACATGTCCAACTTGAACGAGATCATTTTGATGAACAACGCATTCCGATCGTGCTTGCCTTCGGAGATTGGGCTTTTGAAGAACCTGACGGTGTTCGACGTCAGCTTTAATCAGCTTCTTGGTCCCATACCGAACGCAGTTGGAAACGCCGTTAGCTTGGAGCAGCTCAATGTGGCGCATAACTTGCTCTCTGGTCAAATTCCAGCTAGCATTTGTATGTTGCCTCACCTTCAGAACTTCACTTATTCCTTTAACTTCTTCACCGGTGAGCCTCCCGCATGTCTCGCATTGCCGGCGTTTGATGACAGGGTAAACTGCTTACCGGCGAGGCCTCTGCAGAGGCCTCCGGCGCAATTGTATTTGCCACCGCCACATTCTTCCCCTACACCACCTGCTCATAATTACGGCTCTCCGCCACCCCATCACTCACCCGCTCAACCTGTTTATCCTTATTTATCACCGCCACCTCCTCCCTCTGTCCATTCTTCACCTCCACCACCACCACCACCACCTTGTATAGAACTTCCTCCACCCCCTCCCCAATCTACACCTTCTCCCACACCTTACCTGCCACCACCATCCCCATCTCCTCCCCCGCCACCGCCACCGGTATACCATTCTCCACCGCCGGCATCACCGCCTCCGTGCGAAACTCCACCTTCAGTTTCTCCGCCTCCACCACCTGCCCCAGTATACGAAGGGCCATTACCACCTATCGTTGGACTCCCATACGCGTCGCCTCCACCACCACCCTTTTATTGA 1542 0.5143 MMMMKKKDAAYSSILTLLLIATLLSLTVSASSLSDAEAMYVKQRQLLYYRDEFGDRGENVIVDPSLAFENDRLRNAYIALQAWKQAILSDPRNQTADWVGSDVCSYTGVYCAPALDIPKIRTVAGIDLNHCDIAGYLPEELGLLLDLALFHVNSNRFCGTVPHKFERLKLLYELDLSNNRFAGNFPEVVLRLPSLKFLDLRFNEFEGTVPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPIPNAVGNAVSLEQLNVAHNLLSGQIPASICMLPHLQNFTYSFNFFTGEPPACLALPAFDDRVNCLPARPLQRPPAQLYLPPPHSSPTPPAHNYGSPPPHHSPAQPVYPYLSPPPPPSVHSSPPPPPPPPCIELPPPPPQSTPSPTPYLPPPSPSPPPPPPPVYHSPPPASPPPCETPPSVSPPPPPAPVYEGPLPPIVGLPYASPPPPPFY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00377 513 PRINTS Proline rich extensin signature 442 458 - -
Gma08g00377 513 PRINTS Proline rich extensin signature 368 384 - -
Gma08g00377 513 PRINTS Proline rich extensin signature 418 439 - -
Gma08g00377 513 PRINTS Proline rich extensin signature 388 400 - -
Gma08g00377 513 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 511 - -
Gma08g00377 513 Pfam Leucine rich repeat N-terminal domain 79 111 IPR013210 -
Gma08g00377 513 Gene3D Ribonuclease Inhibitor 75 238 IPR032675 -
Gma08g00377 513 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 12 511 - -
Gma08g00377 513 MobiDBLite consensus disorder prediction 375 513 - -
Gma08g00377 513 SUPERFAMILY L domain-like 78 358 - -
Gma08g00377 513 Gene3D Ribonuclease Inhibitor 239 361 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00377 Gma-Chr8 3159317 3162615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00377 2 378 Trihelix Transcription Factor Family AT4G18670 73.177 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00377 - - gmx:100814585 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00377 08 3159317 3162615 Gma08g00377 08 3159317 3162615 ECH
Gma05g02256 05 43590336 43592369 Gma08g00377 08 3159317 3162615 GST