Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00375 ATGACTAGCCTTACTAATGGCGATGCTGGCTCCCTCAACAAGGTCCCCACGATCAAGTTCACCAAGCTCTTCATTAATGGAGACTTCGTTGACTCTCTGTCAGGAAAGACATTTGAGACAATAGATCCAAGAACAGGAGATGTTATAGCGAGGATAAGCGAGGGAGATAAAGAAGACATTGACATTGCTGTTAAAGCAGCACGTCATGCATTTGACAACGGTCCATGGCCTCGCCTTCCCGGCTCTgagagagcaagaatattgctgaaatgggcagaaataattgaggaaaacgcagaagaacttgcagcactagatgcgattgatgcggggaagttgtaccatatgtgtaggaatgtggaagttccagcagcggcaaacactcttcgttactatgctggtgcagccgataagattcatggagaggtgttgaaaatgtctcgagagttccatgcctatacattacttgaaccacttggtgttgtgggacacattactccctggaatttccccaataccatgttctacatcaaagtcgctccttctttagctgctggctgcaccatggtcctcaagcctgctgagcaaacacccctctctgctttgttttctgctcatcttgctaaattggctggaatcccagatggagtgatcaatgtagtgcctggatttggcccaactgctggtgctgcattaagctcacacatggatgttgataaggtcagctttaccggttcaacacaaacaggccgtgtgataatgcaggctgcagcaaagagtaacttgaaacaagtttcacttgaattaggaggcaagtcACCCCTCATAATTTTTGATGATGCAGATATAGACAAAGCTACTGAGCTAGCTCTACTAGGCATCCTATATAACAAGGGAGAAGTTTGTGTTGCAAGTTCCCGTGTGTTTGTTCAAGAAGGGATCTATGATGAATTTGAGAAAAAACTGGTGGAGAAGGCAAAAGCTTGGGTCGTTGGGGATCCCTTTGATCCTAAAGTTCAACAAGGCCCTCAGGTTGACAAGGAACAATTTGAAAAAGTTCTTTCATATATTGAGCATGGAAAGAAAGAAGGAGCTACCCTTTTGACCGGGGGTAAAACAGTGGGGAACAAGGGCTACTTTATTGAGCCGACAATTTTCTCCAATATAAGAGAGGATATGCTTATAGCACAGGATGAAATATTTGGCCCAGTGATGGCACTGAAGAAGTTTAAGACCACTGAGGAAGCAATTAAGAGTGCTAACAATACCAAGTATGGCCTAGCAGCAGGCATAGTGACCAAGAATTTGGATACAGCAAACACAGTGTCAAGGTCCATTCGGGCAGGCACTATATGGATCAACTGCTATTTTGCCTTTGGCGATGATGTTCCCTTTGGAGGATATAAGATGAGTGGATTTGGAAAAGATCATGGATTGGAAGCCCTTCACAAGTACCTACAAGTTAAATCTGTTGTTACTCCCCTTTACAATTCTCCCTGGCTTTGA 1506 0.2689 MTSLTNGDAGSLNKVPTIKFTKLFINGDFVDSLSGKTFETIDPRTGDVIARISEGDKEDIDIAVKAARHAFDNGPWPRLPGSERARILLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEVPAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFSAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGRVIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKATELALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTTEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00375 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Gma08g00375 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Gma08g00375 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Gma08g00375 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Gma08g00375 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Gma08g00375 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 501 - -
Gma08g00375 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 501 - -
Gma08g00375 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00375 Gma-Chr8 3141673 3146454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00375 14 501 Aldehyde Dehydrogenase Gene Family AT3G24503 71.575 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00375 K12355 - gmx:100811540 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02254 05 43567817 43572529 Gma08g00375 08 3141673 3146454 GST
Gma08g00375 08 3141673 3146454 Gma07g00790 07 8358352 8362915 PCT
Gma08g00375 08 3141673 3146454 Gma09g01756 09 43183139 43187346 PCT
Gma07g00790 07 8358352 8362915 Gma08g00375 08 3141673 3146454 PCT
Gma09g01756 09 43183139 43187346 Gma08g00375 08 3141673 3146454 PCT