Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00359 ATGGGGGAAGGTGAAGCTGAGGGGAGTGATGGCGCTCCCAAGAATGTTGTGGCAAACGACGTCGTTGCCAATGCGCTGTTGCCGTTCGATGTTCCCGCCAAGAAGTTAGCGCGGCAGCTCGATTTCACCGGCTTCGGCGGGATGTCGACGACGCCGCAGCCGCAGCCGCCGGTGGTTTTGCCGCTGCGGCCTTCTACTTCTGTCAGGGTTGGGAAACCAGAATCTCCTAAATCAAGACCGAGGCCTGGCTTTGAAATTAAAGAAGCTACCCCGAAGAAGCAGAAGCAGTGCAATTGTAAACATTCAAAATGCCTGAAACTATATTGTGAATGTTTTGCTTCGGGAATATATTGTGACGGCTGCAACTGTGTAAATTGTTGTAACAATGTGGAAAACGAAGCTGCTAGACGAGAAGCAGTTGAAGCTACTTTAGAACGGAATCCAAATGCATTTAGGCCAAAAATAGCAAGTAGCCCTCATAGAACACGTGATATCAGGGAGGATGCTGGGGAAATTTTGATATTGGGAAAGCATAATAAAGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTATTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAACTTGGTGTATATTCAGCAAGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTATTCTTCACCACCAATATCAAAGAAAAGAAAAGGTCAAGAACTCTTATTTGGGCCAACCGTCAAGGATCCATCAGTTGGCAGGCAGGGGCAACAGgcaaacaatgtcagagttcctgcaccctcctcatccttGTCACCTATcccaggtgctcgtgttggaccagcaacattaggtccttcaaaattaatgtacagGTCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAGGAACTTTGCTCAGTTCTGGTGCTAGTATCTGGACAAGCCGCTAAGACATTTACAGACCAGAAAAATTTAATGGATAAGCATGCAGAAGATCAGACAGAAACTTCTCGTGCTTCTTCAACTCAGGAGCAATTACCAAGCCAAAAGGAAGCTAATGTTGACAAAGCTATGGCTGATGATGATTGTTCGAGTGCAAACCAGACAGATAATATCAGCCTGGATAATTCTTGTTCAGATGGTGCTGATGCCCCAAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGCGATGAGCAAGATACAATGTTCATGACTGCTGCCTCCCCTGTTGGATCAAGGACACATGCTTGCAACACATCTTTGCAACCGCCTTATGGGCAAGTAATGACAGAGGTCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTTAGAGATTTTCTCAATAGAGTTATCACTATGGGAGAAATAAATGAAACAAAGTGCTCTTCATTAGCCAGAAGTGAATTAGAGAGTCAAAAGGGCCCAAACATGAATTGCAGTGGAAATGACAGTACTGAGACAGCACATCAGCAGGCAGCCACTAATAATAACATTAACGGTGTTGCCAAAGCTGCGGCGGGCAACTCCATTTTGTTCCCTGGTAGTGGTAGTTCCTGA 1656 0.4251 MGEGEAEGSDGAPKNVVANDVVANALLPFDVPAKKLARQLDFTGFGGMSTTPQPQPPVVLPLRPSTSVRVGKPESPKSRPRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCCNNVENEAARREAVEATLERNPNAFRPKIASSPHRTRDIREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNLVYIQQAANAAITGAIGSSGYSSPPISKKRKGQELLFGPTVKDPSVGRQGQQANNVRVPAPSSSLSPIPGARVGPATLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFTDQKNLMDKHAEDQTETSRASSTQEQLPSQKEANVDKAMADDDCSSANQTDNISLDNSCSDGADAPKGRPMSPGTLALMCDEQDTMFMTAASPVGSRTHACNTSLQPPYGQVMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKGPNMNCSGNDSTETAHQQAATNNNINGVAKAAAGNSILFPGSGSS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00359 551 MobiDBLite consensus disorder prediction 277 294 - -
Gma08g00359 551 MobiDBLite consensus disorder prediction 365 379 - -
Gma08g00359 551 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 63 517 - -
Gma08g00359 551 SMART CXC_2 92 132 IPR033467 -
Gma08g00359 551 SMART CXC_2 177 218 IPR033467 -
Gma08g00359 551 MobiDBLite consensus disorder prediction 274 301 - -
Gma08g00359 551 MobiDBLite consensus disorder prediction 500 519 - -
Gma08g00359 551 MobiDBLite consensus disorder prediction 391 407 - -
Gma08g00359 551 ProSiteProfiles CRC domain profile. 93 217 IPR005172 -
Gma08g00359 551 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 94 129 IPR005172 -
Gma08g00359 551 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 180 214 IPR005172 -
Gma08g00359 551 PANTHER TESMIN/TSO1-RELATED 63 517 IPR028307 -
Gma08g00359 551 MobiDBLite consensus disorder prediction 351 417 - -
Gma08g00359 551 MobiDBLite consensus disorder prediction 47 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00359 Gma-Chr8 3018737 3024794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00359 31 503 CPP Transcription Factor Family AT4G29000 56.597 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gma08g00359 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00359 - - gmx:100777327 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00359 08 3018737 3024794 Gma08g00359 08 3018737 3024794 ECH
Gma05g02235 05 43426602 43434403 Gma08g00359 08 3018737 3024794 GST