Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00340 ATGGCTGGTGGAGGAGTAGAGATTGGAGGACCAGGAAAAAGGGCTCATCTTTACGAGCACAAGTTCAGTTGGTATTTCGTCTATACATGCTTCGTTGGGGCCCTTGGTGGTTCTCTCTTTGGCTATGATCTCGGTGTTTCAGGTGGGGTGACTTCAATGGATGATTTCCTGAAGGAATTCTTCCCAAAGGTGTACAGAAGGAAGCAGATGCATCTGCATGAAACAGACTATTGTAAATATGACGACCAAGTGCTGACACTGTTTACATCATCTCTTTATTTCTCAGCACTTGTCATGACATTCTTTGCTTCCTTCTTGACAAGAAAGAAGGGAAGAAAGGCCAGTATCATTGTGGGAGCCCTTAGCTTCCTGGCTGGGGCTATCCTCAATGCCGCAGCCAAGAACATTGCAATGCTAATTATTGGCAGAGTCCTTCTTGGTGGAGGCATTGGATTTGGCAACCAAGCTGTTCCATTGTATCTTTCGGAAATGGCTCCAGCTAAGAACCGAGGAGCAGTGAACCAACTGTTTCAGTTCACAACTTGTGCTGGAATCTTAATTGCAAACCTAGTGAATTACTTTACTGAAAAAATCCATCCCTATggatggaggatatctctgggtttggcaggtcttccagcatttgcaatgcttgttggaggtatttgttgtgctgagacaccaaacagccttgtggagcaaggaaggttggataaagcaaaacaagtattgcagagaattagaggtaccgagaacgttgaagccgaatttgaggatcttaaagaagccagtgaagaagcacaagctgttaagagcccgtttaggacactcctcaagaggaagtacaggccacaactgatcatAGGTGCATTGGGGATTCCAGCGttccagcagctaactggcaataactccatcctcttctatgcccctgtcatttttcagagcttgggctttggtgccaatgcttcactgttttcatcttttattaccaatggggctcttcttgttgccactgtcatctcaatgtttttggttgacaagtatggtagaagaaaattctttctggaagctggctttgaaatgATATGCTGCATGATTATTACAGGTGCAGTCTTGGCTGTGAACTTTGGGCACGGCAAAGAAATTGGGAAAGGAGTGAGTGCCTTTCtggttgttgtgatcttcttgttcgttttggcatatgggagatcttggggtccccttgggtggttggttcccagtgagctcttcccattagagataagatcatctgcacagagtattgtggtctgtgtcaacatgatcttcactgcacttgttgctcaattgttcctcatgtcactttgccacctcaaatttgggatcttcttgctctttgcttccttaattatcttcatgagcttctttgtcttcttccttttgcccgaaaccaagaaagttccaattgaggagatTTATCTTCTTTTTGAGAATCATTGGTTCTGGAGGAGATTTGTAACTGACCAAGACCCAGAGACATCAAAGGGGACTGCTTAA 1536 0.2305 MAGGGVEIGGPGKRAHLYEHKFSWYFVYTCFVGALGGSLFGYDLGVSGGVTSMDDFLKEFFPKVYRRKQMHLHETDYCKYDDQVLTLFTSSLYFSALVMTFFASFLTRKKGRKASIIVGALSFLAGAILNAAAKNIAMLIIGRVLLGGGIGFGNQAVPLYLSEMAPAKNRGAVNQLFQFTTCAGILIANLVNYFTEKIHPYGWRISLGLAGLPAFAMLVGGICCAETPNSLVEQGRLDKAKQVLQRIRGTENVEAEFEDLKEASEEAQAVKSPFRTLLKRKYRPQLIIGALGIPAFQQLTGNNSILFYAPVIFQSLGFGANASLFSSFITNGALLVATVISMFLVDKYGRRKFFLEAGFEMICCMIITGAVLAVNFGHGKEIGKGVSAFLVVVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSIVVCVNMIFTALVAQLFLMSLCHLKFGIFLLFASLIIFMSFFVFFLLPETKKVPIEEIYLLFENHWFWRRFVTDQDPETSKGTA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00340 511 Coils Coil 250 270 - -
Gma08g00340 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 478 IPR020846 GO:0022857
Gma08g00340 511 Gene3D MFS general substrate transporter like domains 13 492 IPR036259 -
Gma08g00340 511 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 510 IPR045262 GO:0015144
Gma08g00340 511 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 510 - -
Gma08g00340 511 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma08g00340 511 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma08g00340 511 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma08g00340 511 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma08g00340 511 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma08g00340 511 SUPERFAMILY MFS general substrate transporter 19 484 IPR036259 -
Gma08g00340 511 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma08g00340 511 Pfam Sugar (and other) transporter 30 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma08g00340 511 CDD MFS_STP 32 476 IPR044778 GO:0015145|GO:0015749
Gma08g00340 511 ProSitePatterns Sugar transport proteins signature 1. 341 358 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00340 Gma-Chr8 2860948 2863955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00340 1 501 Organic Solute Cotransporters AT4G02050 55.378 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00340 K24193 - gmx:547680 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00340 08 2860948 2863955 Gma08g00340 08 2860948 2863955 ECH
Gma05g02221 05 43280730 43285187 Gma08g00340 08 2860948 2863955 GST
Gma09g01804 09 43617186 43627646 Gma08g00340 08 2860948 2863955 PCT