Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00337 atggctgagctacctagctcagaagcatcgtcatcatccgcttccagtcggaagcactcgtcttcGGAGGCCCATTTACCCGCCCCGGATCAGAAAAGGCCCAAGCAGGCCCGAGATAGCAGCAGCAAgcaccccgtctacagaggggtccgaatgcgggcctggggaaagtgggtatccgaaatacgcgagcccagaaagaagaaccggatctggctcggaacctttgccaccgccgagatggccgcacgtgcgcacgacgtggcggcgctcgccatcaaaggcaactccgccattctcaacttcccagaactcgcggcctcccttccccgacccgactccaactcgccaagagacgttcaggccgccgccgccaaagccgccgccatggaggttaacgatgttccgacgacgccttcgtcttcgtcgtcgtcggcgtctctgtcgctatcgcaatcgtcatcttggtcttcattggcggtttcttcttcctccggcgatggcccgtcgacgccggaggagctgggggagatagtggagctgccgaGTTTCTCAATGTCATCCTCCTTCTCCTTCCGCGTGTTGCACAACACGACAGGTTGGATTCAACACTTGGTGCGCTGTTAA 627 0.1244 MAELPSSEASSSSASSRKHSSSEAHLPAPDQKRPKQARDSSSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELAASLPRPDSNSPRDVQAAAAKAAAMEVNDVPTTPSSSSSSASLSLSQSSSWSSLAVSSSSGDGPSTPEELGEIVELPSFSMSSSFSFRVLHNTTGWIQHLVRC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00337 208 MobiDBLite consensus disorder prediction 23 46 - -
Gma08g00337 208 Pfam AP2 domain 45 95 IPR001471 GO:0003700|GO:0006355
Gma08g00337 208 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Gma08g00337 208 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Gma08g00337 208 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 189 - -
Gma08g00337 208 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Gma08g00337 208 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Gma08g00337 208 MobiDBLite consensus disorder prediction 1 46 - -
Gma08g00337 208 MobiDBLite consensus disorder prediction 110 129 - -
Gma08g00337 208 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g00337 208 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 10 189 - -
Gma08g00337 208 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Gma08g00337 208 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Gma08g00337 208 CDD AP2 47 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00337 Gma-Chr8 2840440 2843080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00337 4 208 AP2-EREBP Transcription Factor Family AT5G11590 53.659 4.72e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma08g00337 AP2 5.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00337 K09286 - gmx:100778201 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00337 08 2840440 2843080 Gma08g00337 08 2840440 2843080 ECH