LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma08g00327	ATGCTTCTAGCAGCTTCGGAATCCTTGGCTAAACAAGTGAGTGAGGAGAACTACAAAAATGGCTTGATTTACCCCCCATTCTCTAATATCAGAAAAATTTCGGCTAATATAGCTGCAAATGTTGCTGCCAAGGCATACAAACTAGGCTTGGCTACCCGTCTTCCTCGTCCTCAGAATCTTGTGAAATTTGTTTCGTTTGAAGGAATTATGGGTCGTCGTAAGATTGAGATTACGGAGGTGAAGGACTCCAACACCAAGCAAGTTACATTTTCCAAGCGTCGAACAGACAAGTTTCTTAAACAAGAGCCGAAATCAAATGATGTCCAGGGAACATCTATTGAGGTTGCTGATATGGATAGGCTCAATCAACAACTATCCGATGTTCAAAATGAAATACTCGAGGAACAAAAGAAGGCTGCAGAACTCAATGAGAGACTGAAACAAAAAGGAGTCACACAACCTTTTCAAACTAAAGAATTGCAAGGTTCAAATTTAGAGATCCAAAAGATGAAGGACTGTTATGATGCAATCGAGTCTGCACCTGAACACCACGTTCATGTGCTTGATCTCCATTGCTGCAATCTCTCTGGTTTTGCTGGAGCTTCCCAACGACAACATGTGAAACTCCTCCTCATCGGTGGTGAGCCTAGCTTTGTTCCTCGGCGGCGGCAGCATCGAAGCGCCACCAACGTGGCTTCTATTTTGTTTCTTGGTGGGTTGCAAAAATGA	729	0.4335	MLLAASESLAKQVSEENYKNGLIYPPFSNIRKISANIAANVAAKAYKLGLATRLPRPQNLVKFVSFEGIMGRRKIEITEVKDSNTKQVTFSKRRTDKFLKQEPKSNDVQGTSIEVADMDRLNQQLSDVQNEILEEQKKAAELNERLKQKGVTQPFQTKELQGSNLEIQKMKDCYDAIESAPEHHVHVLDLHCCNLSGFAGASQRQHVKLLLIGGEPSFVPRRRQHRSATNVASILFLGGLQK	242

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma08g00327	242	SUPERFAMILY	SRF-like	70	95	IPR036879	GO:0003677\|GO:0046983
	Gma08g00327	242	Pfam	Malic enzyme, NAD binding domain	1	46	IPR012302	GO:0051287
	Gma08g00327	242	Gene3D	-	1	73	-	-
	Gma08g00327	242	Coils	Coil	240	242	-	-
	Gma08g00327	242	Coils	Coil	118	149	-	-
	Gma08g00327	242	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1	65	IPR036291	-
	Gma08g00327	242	ProSiteProfiles	MADS-box domain profile.	70	100	IPR002100	GO:0003677\|GO:0046983
	Gma08g00327	242	PANTHER	MALIC ENZYME-RELATED	1	64	-	-
	Gma08g00327	242	PANTHER	NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC	1	64	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma08g00327	Gma-Chr8	2776982	2783807	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma08g00327	70	100	Type I MADS-box Gene Family	AT3G66656	67.742	2.73e-06	44.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma08g00327	K00029		-	gmx:100804079	195.282

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