Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00327 ATGCTTCTAGCAGCTTCGGAATCCTTGGCTAAACAAGTGAGTGAGGAGAACTACAAAAATGGCTTGATTTACCCCCCATTCTCTAATATCAGAAAAATTTCGGCTAATATAGCTGCAAATGTTGCTGCCAAGGCATACAAACTAGGCTTGGCTACCCGTCTTCCTCGTCCTCAGAATCTTGTGAAATTTGTTTCGTTTGAAGGAATTATGGGTCGTCGTAAGATTGAGATTACGGAGGTGAAGGACTCCAACACCAAGCAAGTTACATTTTCCAAGCGTCGAACAGACAAGTTTCTTAAACAAGAGCCGAAATCAAATGATGTCCAGGGAACATCTATTGAGGTTGCTGATATGGATAGGCTCAATCAACAACTATCCGATGTTCAAAATGAAATACTCGAGGAACAAAAGAAGGCTGCAGAACTCAATGAGAGACTGAAACAAAAAGGAGTCACACAACCTTTTCAAACTAAAGAATTGCAAGGTTCAAATTTAGAGATCCAAAAGATGAAGGACTGTTATGATGCAATCGAGTCTGCACCTGAACACCACGTTCATGTGCTTGATCTCCATTGCTGCAATCTCTCTGGTTTTGCTGGAGCTTCCCAACGACAACATGTGAAACTCCTCCTCATCGGTGGTGAGCCTAGCTTTGTTCCTCGGCGGCGGCAGCATCGAAGCGCCACCAACGTGGCTTCTATTTTGTTTCTTGGTGGGTTGCAAAAATGA 729 0.4335 MLLAASESLAKQVSEENYKNGLIYPPFSNIRKISANIAANVAAKAYKLGLATRLPRPQNLVKFVSFEGIMGRRKIEITEVKDSNTKQVTFSKRRTDKFLKQEPKSNDVQGTSIEVADMDRLNQQLSDVQNEILEEQKKAAELNERLKQKGVTQPFQTKELQGSNLEIQKMKDCYDAIESAPEHHVHVLDLHCCNLSGFAGASQRQHVKLLLIGGEPSFVPRRRQHRSATNVASILFLGGLQK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00327 242 SUPERFAMILY SRF-like 70 95 IPR036879 GO:0003677|GO:0046983
Gma08g00327 242 Pfam Malic enzyme, NAD binding domain 1 46 IPR012302 GO:0051287
Gma08g00327 242 Gene3D - 1 73 - -
Gma08g00327 242 Coils Coil 240 242 - -
Gma08g00327 242 Coils Coil 118 149 - -
Gma08g00327 242 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 65 IPR036291 -
Gma08g00327 242 ProSiteProfiles MADS-box domain profile. 70 100 IPR002100 GO:0003677|GO:0046983
Gma08g00327 242 PANTHER MALIC ENZYME-RELATED 1 64 - -
Gma08g00327 242 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00327 Gma-Chr8 2776982 2783807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00327 70 100 Type I MADS-box Gene Family AT3G66656 67.742 2.73e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00327 K00029 - gmx:100804079 195.282