Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00323 ATGGACGAGGACGAGCAACTCGAACGATTCGACTCGGAGTTCGCCTCCACGAGTTCCATTTCCTCCACCCTCAGCACCGACGATTTCCGCAACCTCACCAGCTCCGGCGACATTTCCTCCATCAGCAGCGGCTCCGGCGAGATTCCTCCCGTCGCGGTCCTCGCGCCTCCGTTTCTCTACCGCGAGGGGTCCAATGACGTCGAGACGGCGCCGGCGCCCAGGGAGAAGTGCGTGGGAAGGAGTAACAAGGGAGTGAGCTGGGGGCACACTTCTGTGATTGGGAGAAGGAAAGAGATGGAGGACGCCATCGCCGTTATTCCGGGATTCATGTCTCGCACGTGCGATCGCGTCGGGGGTTGTACGGCTCCCGGTTCTAGATCCTCCGGCGAGATCGCTCCGCTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAGTTTTGTGCGAAGCGGATGCACGATGTTATAGCAGAGGAATGGGACCGAGAAATGGGAGGTGCCGCTGAATGGCAGAGAAGATGGGAAGCTGTATTTGCTAACAGTTTTGAGAGGACTGATAATGAAATCCTCTCAGACGCAGTTGCACCAGAAATGGTAGGATCTACTGCCTCTGTGGTGGTTCTATCTGGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACACAAACTATCCCCTTGACAGTGGATCAGAAGCCGGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTATTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCGTGGATTATTCCGGTGCCAGAGATAACTTTCACCGCAAGAACCGATGAGGATGAGTGCTTAGTTTTGGCAAGTGATGGACTCTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCACGCCGCATTCTTAGAAGGCGTCGCAGATCCTTGTCAATGGAGGAAACATCTCCTGCACAAGTTGTTGCCGAAAGCTTGACTGAAATTGCATATGGTCGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1158 0.5173 MDEDEQLERFDSEFASTSSISSTLSTDDFRNLTSSGDISSISSGSGEIPPVAVLAPPFLYREGSNDVETAPAPREKCVGRSNKGVSWGHTSVIGRRKEMEDAIAVIPGFMSRTCDRVGGCTAPGSRSSGEIAPLHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMGGAAEWQRRWEAVFANSFERTDNEILSDAVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLVLASDGLWDVMTNEEVGEVARRILRRRRRSLSMEETSPAQVVAESLTEIAYGRNSKDNISIIVVDLKSKRKRQQRPPLIS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00323 385 MobiDBLite consensus disorder prediction 12 27 - -
Gma08g00323 385 SUPERFAMILY PP2C-like 78 372 IPR036457 -
Gma08g00323 385 Pfam Protein phosphatase 2C 94 364 IPR001932 -
Gma08g00323 385 ProSitePatterns PPM-type phosphatase domain signature. 136 144 IPR000222 GO:0043169
Gma08g00323 385 PANTHER ALPHABET, ISOFORM E-RELATED 64 380 - -
Gma08g00323 385 MobiDBLite consensus disorder prediction 1 27 - -
Gma08g00323 385 CDD PP2Cc 88 371 IPR001932 -
Gma08g00323 385 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 64 380 - -
Gma08g00323 385 SMART PP2C_4 76 369 IPR001932 -
Gma08g00323 385 ProSiteProfiles PPM-type phosphatase domain profile. 86 371 IPR001932 -
Gma08g00323 385 Gene3D - 76 381 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00323 Gma-Chr8 2759096 2765405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00323 87 381 PP2C-type Phosphatase Gene Family AT4G26080 50.476 2.08e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00323 K14497 - gmx:100793293 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00323 08 2759096 2765405 Gma08g00323 08 2759096 2765405 ECH
Gma05g02208 05 43178234 43187421 Gma08g00323 08 2759096 2765405 GST