Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00316 atgggtagagccatcaggtggttgaagggGTTGTTTGGGATAAGGACAGACAGAGAGCGCAAAGAAAATTCAAATCACTCAGACAGAGATTCCCGAGGTCTATGTCATAATCCAACCACCATTCCACCCAATATTTCACCTGCAGAGGCCGCTTGGCTTCAATCCTTCTACTCAGAAACTGAGAAGGagcagaataagcatgctattgcagttgctgcagccactgcagcagccgcagatgccgcagtggctgcagcacaggccgccgtggcagtggttagactaaccagccacggcaacagcagagacaccacGTTTGGTGGTGCTGGACAAGAAAGGTTGGCTGTTGTCAAGATTCAAACCGTGTTTAGAGGATATTTGGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTACAAGCACTTGTGAGAGGGTACTTAGTGCGGAAGCAGGCAGCAGCAACCCTGCATAGTATGCAGGCTCTAATTAGAGCTCAAGCAACAGTAAGGTCTAAGAAATCTCGCAATGAAGCTCATAGGTTTCAAACACAAGCGCGAAGATCCATGGAGAGATTTGATGACATAAAGAGTGTGTACATAGCTCCCATCCAAAGCAGAAGGCTATCATCTTCTTTTGATGCCACAATGAACAATGCAAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACACTGGCAGTGGCAGGCCAAAGTCAAGGTCTCGCAGGAGCAACACCTCAATGTCAGATTTTGGTGATGACCCATCATCATTCCAGGCACTTCCTTCTCCTCTCCCATTTGCTCATTTGTCCATACCAAACCTCAGGAATTACCACAACTCAGAGTGGGGCTTAACAGGAGAAGAGTGCAGATTCTCCACAGCACAAAGCACTCCACGCTTCACCACCAACTCTTGTAGTTGTGGAGGATCTGTTGTTGTTGCTGCACCTACGAATATGAGTATGAGTATGACACCTAAAAGTGTTTGCACCGAGAACAACTTCTTCTATGGGCAGTATCATGACAATTTTCCAAACTACATGGCCAGCACTCAGTCTTTCAAGGCCAAACTGAGGTCTCATAGTGCTCCAAAGCAACGCCCCGATCCAGCTGGGCCAAAGAAGAGGCTTACCCTCAACGAGATGATGGAGTCTAGGTGTAGTTTAAGTGGGACTAGAATGCAAAGGTCTTGCTCTCAGATTCAAGAAGCTATCAGTTTTAAGAATGCTGTCATGAGTAAGCTTCAGAAGTCTGCAGAACTTGGAAGGGACACAGAATTGAACTTTTCCAACCAAAGGAGGTGGTGA 1317 0.4039 MGRAIRWLKGLFGIRTDRERKENSNHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGNSRDTTFGGAGQERLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALIRAQATVRSKKSRNEAHRFQTQARRSMERFDDIKSVYIAPIQSRRLSSSFDATMNNANSVDGSPKIVEVDTGSGRPKSRSRRSNTSMSDFGDDPSSFQALPSPLPFAHLSIPNLRNYHNSEWGLTGEECRFSTAQSTPRFTTNSCSCGGSVVVAAPTNMSMSMTPKSVCTENNFFYGQYHDNFPNYMASTQSFKAKLRSHSAPKQRPDPAGPKKRLTLNEMMESRCSLSGTRMQRSCSQIQEAISFKNAVMSKLQKSAELGRDTELNFSNQRRW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00316 438 MobiDBLite consensus disorder prediction 18 33 - -
Gma08g00316 438 Pfam Protein of unknown function (DUF4005) 326 396 IPR025064 -
Gma08g00316 438 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gma08g00316 438 MobiDBLite consensus disorder prediction 242 258 - -
Gma08g00316 438 MobiDBLite consensus disorder prediction 219 258 - -
Gma08g00316 438 Gene3D - 111 154 - -
Gma08g00316 438 MobiDBLite consensus disorder prediction 358 379 - -
Gma08g00316 438 MobiDBLite consensus disorder prediction 18 38 - -
Gma08g00316 438 PANTHER IQ-DOMAIN 5-RELATED 1 422 - -
Gma08g00316 438 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Gma08g00316 438 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Gma08g00316 438 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Gma08g00316 438 SMART iq_5 134 155 IPR000048 GO:0005515
Gma08g00316 438 SMART iq_5 111 133 IPR000048 GO:0005515
Gma08g00316 438 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00316 Gma-Chr8 2693745 2695409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00316 1 397 IQD Protein Family AT3G16490 50.750 5.23e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00316 - - gmx:100800892 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00316 08 2693745 2695409 Gma08g00316 08 2693745 2695409 ECH
Gma05g02201 05 43114654 43116392 Gma08g00316 08 2693745 2695409 GST