Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00298 ATGGGAAGAGCTCCATGTTGTGACAAAGCTAACGTGAAAAGAGGGCGTTGGTCTCGCCTTAAGCGCTGTGGAAAGAGTTGTCGTCTGAGATGGCTGAACTATCTCAGGCCTCATATCAAGCATGGAGACTTCACTCGTCAGGAAGACCAACTTATCTGCACCCTTTATGCCACCATCGGAACCATGCACGTGTCCCTTATTGCTGCTCAGCTACCTGGGAGAACAGACAATGATGGGAAAAATCATTGGAACACTAAGTTAAATAAAACTTTTTTGGCAGCAAACACCAATGCCATTGCCAGTACTGTTTTCTCAACTTCCACTTCTCAGCCTCAACTTGAAGACTACAGTGTCTTTGATGATCACGAGAACTCAGCTGAGTATCTTGTCTTGGGTTTGGAGCAAACACCATTGCCTTTAGGATCAGATGTTTTTGGTCTTGGAAGCAGTTGTAGTGTACGACTATCCAATGAAgcagtttcagcttccttggtaaaaaaggaaaatgagaaTGAGACCCAATGGTTTGCTGAAGATGAATCATTTTTGCTTGATTTTGTGTATGAAGATAATGGGTTTGTTTCTCAAGAAAATAGCAGCGAAGTTCCACCTCTCTAA 618 0.4078 MGRAPCCDKANVKRGRWSRLKRCGKSCRLRWLNYLRPHIKHGDFTRQEDQLICTLYATIGTMHVSLIAAQLPGRTDNDGKNHWNTKLNKTFLAANTNAIASTVFSTSTSQPQLEDYSVFDDHENSAEYLVLGLEQTPLPLGSDVFGLGSSCSVRLSNEAVSASLVKKENENETQWFAEDESFLLDFVYEDNGFVSQENSSEVPPL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00298 205 Gene3D - 42 112 - -
Gma08g00298 205 Gene3D - 9 40 - -
Gma08g00298 205 PANTHER TRANSCRIPTION FACTOR RAX2-LIKE 1 19 - -
Gma08g00298 205 PANTHER OS09G0431300 PROTEIN 1 19 - -
Gma08g00298 205 SUPERFAMILY Homeodomain-like 21 93 IPR009057 -
Gma08g00298 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 91 IPR017930 -
Gma08g00298 205 ProSiteProfiles Myb-like domain profile. 36 87 IPR001005 -
Gma08g00298 205 CDD SANT 44 87 IPR001005 -
Gma08g00298 205 SMART sant 40 89 IPR001005 -
Gma08g00298 205 PANTHER OS09G0431300 PROTEIN 20 198 - -
Gma08g00298 205 PANTHER TRANSCRIPTION FACTOR RAX2-LIKE 20 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00298 Gma-Chr8 2527984 2529055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00298 1 92 MYB Transcription Factor Family AT5G65790 57.143 1.40e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00298 K09422 - gmx:100797458 243.432