Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00208 ATGGAGAGTGACTTGAGCTGGGAGCGGAACACACTCATCAATGAGCTAATTCAGGGGATGGAGGTAGCAAGGAAGTTGAAGGCTGACTTGAAGTTGCCGTATTCAGTTGACACAAGAGATCTGCTTCTGCAGAGGATATTATCTTCTTACGAAAAGGCTCTACTGATTCTAAGATGCAGCAATGCATCAACTTCCGAGTTGCAGGGCATGAATCAAGCAACACCAACTTTGCTACCCGAGTCCCCATTATCTGTCCATGGAAGTCCTCTGCGCGAGGACGTTCATGGGGCCATCAAGGATCACCATAATTCAAAGAAAAGAAAGATAACGCCCAAATGGATGGATCGTGTAAGAGTGAGCTGTGAGAGTGGTCTTGAAGGACCACATGAAGATGGTTACAACTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAGCACTCAGGGCTGTTGGGCAACAAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATGTTTGACATAACTTACAGAGGAAATCATACCTGTTCTCAGGGAAACAATGCCGTTCTGCCACCCAAGTCACCAGAAAAACATGAGAAACCAGCACACAGTCATAACATTGACATTCACCATGCACAGGCATCACAAGAAAGCCTTGCAAAGTTCAGAAGTATCTTGTCTGTCAACACAGATAATCTGGACAATGGAGATATGGCATATGCTTTCACTTTCCCTTCCACTTCATTTGGATGCATGAAACAAGACAACCACAGCTTGATTCCTTTGGCCCTGGAGAATGACTCCTTCTTAAGCGACCTATACCAAACACACCTGTTATCCCCAACAACACCAGAATCAAATTATTTCCCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGATCTACAACAGGTCACATTCGAAATCCGATATCAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCTGATTTCAATTTCTCACTTGATCCGGTGGAAATTGATCCAAATTTCCCTTTCAATACCCCAGGATTTTTGTGCTGA 1080 0.4398 MESDLSWERNTLINELIQGMEVARKLKADLKLPYSVDTRDLLLQRILSSYEKALLILRCSNASTSELQGMNQATPTLLPESPLSVHGSPLREDVHGAIKDHHNSKKRKITPKWMDRVRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRSTQGCWATKQVQRSDEDPTMFDITYRGNHTCSQGNNAVLPPKSPEKHEKPAHSHNIDIHHAQASQESLAKFRSILSVNTDNLDNGDMAYAFTFPSTSFGCMKQDNHSLIPLALENDSFLSDLYQTHLLSPTTPESNYFPSPTFQMNEFDGIYNRSHSKSDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFLC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00208 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Gma08g00208 359 Pfam WRKY DNA -binding domain 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00208 359 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
Gma08g00208 359 ProSiteProfiles WRKY domain profile. 124 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00208 359 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g00208 359 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g00208 359 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00208 Gma-Chr8 1800899 1802212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00208 5 259 WRKY Transcription Factor Family AT4G23810 45.993 5.87e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma08g00208 WRKY 3.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00208 - - gmx:100127375 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00208 08 1800899 1802212 Gma08g00208 08 1800899 1802212 ECH
Gma08g00208 08 1800899 1802212 Gma16g00238 16 2573087 2576271 ECH
Gma08g00208 08 1800899 1802212 Gma07g00537 07 5178644 5181564 ECH
Gma08g00208 08 1800899 1802212 Gma03g02359 03 48760348 48763203 ECH
Gma08g00208 08 1800899 1802212 Gma19g02399 19 52546413 52549172 ECH
Gma05g02103 05 42274814 42276126 Gma08g00208 08 1800899 1802212 GST
Gma01g02250 01 57675046 57677042 Gma08g00208 08 1800899 1802212 PCT