Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00197 ATGGAATTTCTACCCATTTTGTCTTCCATTTCCCTTTTGTTGTGTTTGGTTTTGTGGCAAGGAAGTGGTGAACCTGTTGAAGATAAGGAGGCTTTGCTTGACTTTGTGAACAAGTTCCCTCCTTCAAGGCCTTTGAATTGGAATGAGAGTTCCCCCTTGTGTGATTCTTGGACTGGAGTGACTTGCAATGTAGACAAGTCCAAAGTAATAGCAATTAGGTTGCCAGGGGTTGGATTTCATGGCAGTATTCCACCTGATACTATTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTAATAACTGGCCATTTTCCTTCTGATTTTTTCAATCTCAAGAACTTGTCTTTTCTCTATCTTCAGTTCAACAATATTTCTGGTCCTTTGCCTGACTTCTCAGCCTGGAAGAACCTCACTGTTGTCAATTTGTCCGATAACCATTTCAATGGCACCATCCCTTCCTCCCTTAGCAAATTGACTCAGCTTGCTGGTTTGAACCTTGCAAACAACACCCTTTCTGGAGAAATTCCTGACCTCAACCTGTCAAGACTGCAGGTGCTGAATTTGTCCAACAACAACTTGCAGGGCAGTGTTCCTAAATCCCTGCTAAGGTTTTCTGAGTCTGCATTCTCTGGGAATAACATTTCCTTTGGAAGTTTTCCCACGGTTTCTCCGGCGCCTCAACCAGCTTATGAGCCGTCTTTCAAGTCCAGGAAGCATGGAAGGCTCAGCGAAGCGGCGCTGCTGGGAGTTATTGTTGCTGCTGGTGTTTTAGTCCTCGTGTGTTTTGTTTCTTTGATGTTTGTGTGCTGCTCAAGAAGAGGTGATGAGGATGAGGAAACATTCAGTGGAAAGTTGCACAAGGGAGAAATGTCTCCTGAGAAAGCAGTTTCAAGGAACCAGGATGCAAATAATAAACTGGTTTTCTTTGAGGGATGTAATTATGCCTTTGATTTGGAGGATTTATTGAGGGCTTCTGCTGAGGTTCTGGGAAAGGGAACGTTTGGAACTGCCTACAAGGCAATACTTGAGGATGCAACCACGGTTGTTGTGAAGAGGCTGAAGGAGGTAGCCGTTGGAAAGAAGGATTTTGAACAGCACATGGAGATTGTAGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAAAAACTCATGGTATATGATTACCACAGTCAGGGGAGCATCTCTTCCATGTTGCATGGCAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGATACTCGGCTGAAAATAGCCTTAGGTGCTGCAAGAGGCATTGCTCGTATCCATGTTGAGAATGGTGGCAAGCTTGTGCATGGCAACATAAAATGCTCGAACATCTTCCTCAATTCCAAACAGTATGGCTGTGTGTCTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTACCAATATCACGAGCAGCCGGTTACCGTGCACCCGAAGTTACAGACACCAGAAAGGCAGCACAGCCCTCAGATGTTTACAGCTTTGGTGTAGTGTTGCTAGAGCTTCTGACTGGGAAATCCCCTATCCACACAACTGGTGGTGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCGGTTGTGCGCGAGGAGTGGACAGCTGAAGTGTTTGACTTGGAGCTGATGAGATATCCTAACATAGAAGAAGAGATGGTGGAAATGTTGCAGATAGCCATGTCATGTGTGGTTAGGATGCCTGATCAGAGGCCTAAGATGTCTGAAGTTGTGAAGATGATTGAAAATGTGAGGCAGACTGATGCACAGACTCACTCATCATCTGGGAACCAAGCAGAACAACTTAAATTTTCTCAACGTGACAATGGTAACTCTCCTTCCACTCCCTCCTACTTCCAGAGAGGAAGTGAATGA 1917 0.4523 MEFLPILSSISLLLCLVLWQGSGEPVEDKEALLDFVNKFPPSRPLNWNESSPLCDSWTGVTCNVDKSKVIAIRLPGVGFHGSIPPDTISRLSALQTLSLRSNVITGHFPSDFFNLKNLSFLYLQFNNISGPLPDFSAWKNLTVVNLSDNHFNGTIPSSLSKLTQLAGLNLANNTLSGEIPDLNLSRLQVLNLSNNNLQGSVPKSLLRFSESAFSGNNISFGSFPTVSPAPQPAYEPSFKSRKHGRLSEAALLGVIVAAGVLVLVCFVSLMFVCCSRRGDEDEETFSGKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSISSMLHGKRGEDRVPLDWDTRLKIALGAARGIARIHVENGGKLVHGNIKCSNIFLNSKQYGCVSDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQTDAQTHSSSGNQAEQLKFSQRDNGNSPSTPSYFQRGSE 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00197 638 SUPERFAMILY L domain-like 38 208 - -
Gma08g00197 638 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00197 638 ProSitePatterns Protein kinases ATP-binding region signature. 333 364 IPR017441 GO:0005524
Gma08g00197 638 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Gma08g00197 638 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Gma08g00197 638 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Gma08g00197 638 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gma08g00197 638 MobiDBLite consensus disorder prediction 601 638 - -
Gma08g00197 638 Gene3D Transferase(Phosphotransferase) domain 1 403 625 - -
Gma08g00197 638 PANTHER PROTEIN, PUTATIVE-RELATED 22 608 - -
Gma08g00197 638 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00197 638 Gene3D Ribonuclease Inhibitor 137 227 IPR032675 -
Gma08g00197 638 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Gma08g00197 638 PANTHER OS05G0588300 PROTEIN 22 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00197 Gma-Chr8 1719688 1724017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00197 17 631 Receptor kinase-like Gene Family AT4G23740 65.127 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma08g00197 Pkinase 3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00197 - - gmx:100804799 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00197 08 1719688 1724017 Gma08g00197 08 1719688 1724017 ECH
Gma05g02089 05 42182772 42185553 Gma08g00197 08 1719688 1724017 GST
Gma01g02242 01 57593490 57596007 Gma08g00197 08 1719688 1724017 PCT
Gma11g00174 11 1355373 1357852 Gma08g00197 08 1719688 1724017 PCT