Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00174 ATGGATGAATTTGCGTGCTTGAGAGATTGGGATTTGGAAGCTATTGTAAGAGGAAGCACCGGTGAAGCCATCACCATGGATGACCCAAATGCTGATTTTTCTTATTTCTTCTCTGAACAAGATGAGCTACTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGAGTTCTCGATGATTTGGAAGAGCTTTACAAACCCTTCTACCCAGTTTTGCACCCTCTTTCACCGCACACCATCGTTACAACTTCCCTACCTATCAACATGGAACCTAAACAAGTTATCAAAGCATCAGAACAGAAAGTAGCAGCCCTGCAAGGATTGAAAGTCCCCGCAGCACCTAAATGTAAAAAAAGCAAGAAGAGCCAGAACAAGAGTGTGGTGAAGCAAGTGACAACAGCAGAAGGTCTTGACGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCACCATATCCTCGAAGCTATTATAGGTGCAGCAGTTCCAAAGGGTGTTTGGCAAGGAAACAGGTTGAAAGAAGCCACTTAGATCCTGCGGTTTTTCTGGTAACCTACACTGCTGAACACAGCCATCCACACCCAACTCGAAGAAACTCTCTTGCTGGAACCACAAGGAAGAACAATTCCCTTGTTCCTCCTCCAACCACTCATCGTCACCAAAAGAATACTAATTGTTCCTCAAAGTCCATTGAAGTGCAACAAAGCATGAACTTGAAGAAAGAGGAAGATTTTACTGACTGGTTGGATGATGATAGTGCTCAATTTGTTGATGGTTGGATTCCAAGCTCGGATCTTGAGAAACTGATAGGGCTTGAGTGCCAACATTTTGCATTAGATGGTGGTTTCACGGATGATTTTCCACACCCTTAA 879 0.4369 MDEFACLRDWDLEAIVRGSTGEAITMDDPNADFSYFFSEQDELLDSFPEFSETTRVLDDLEELYKPFYPVLHPLSPHTIVTTSLPINMEPKQVIKASEQKVAALQGLKVPAAPKCKKSKKSQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLVPPPTTHRHQKNTNCSSKSIEVQQSMNLKKEEDFTDWLDDDSAQFVDGWIPSSDLEKLIGLECQHFALDGGFTDDFPHP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00174 292 MobiDBLite consensus disorder prediction 199 230 - -
Gma08g00174 292 Gene3D WRKY domain 118 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g00174 292 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00174 292 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 252 - -
Gma08g00174 292 SUPERFAMILY WRKY DNA-binding domain 130 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g00174 292 MobiDBLite consensus disorder prediction 193 230 - -
Gma08g00174 292 ProSiteProfiles WRKY domain profile. 131 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00174 292 Pfam WRKY DNA -binding domain 137 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g00174 292 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 252 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00174 Gma-Chr8 1506030 1507788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00174 1 224 WRKY Transcription Factor Family AT4G23550 46.983 1.10e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma08g00174 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00174 K13426 - gmx:102667104 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00174 08 1506030 1507788 Gma08g00174 08 1506030 1507788 ECH
Gma08g00174 08 1506030 1507788 Gma10g02188 10 49465910 49467025 ECH
Gma08g00174 08 1506030 1507788 Gma18g02196 18 55762651 55764722 ECH
Gma08g00174 08 1506030 1507788 Gma16g00288 16 3041246 3043246 ECH
Gma05g02071 05 41968198 41969676 Gma08g00174 08 1506030 1507788 GST
Gma01g02223 01 57442275 57443111 Gma08g00174 08 1506030 1507788 PCT
Gma11g00193 11 1517954 1518722 Gma08g00174 08 1506030 1507788 PCT