Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00167 ATGACCACAAAAGGGTCAAGCTCTTCTGCTGCTTCTTCAGCTTCAGGGGATGCTAAAATCAAAAGGGTTCTCACCCATGGTGGTAAATACGCACAGTACAATGTGTATGGAAACTTGTTCGAGGTGTCTTCCAAGTATGTGCCTCCTATTCGCCCTATTGGTAGAGGCGTTAATGGCATAGTCTGTGCTGCTGTTAATTCCGAAACACACGAACAAGTTGCAATCAAGAAGATCGGCAACGCATTTGACAATATAATTGATGCTAAGAGAACATTGAGAGAAATCAAGCTCCTTCGTCACATGGACCATGATAATATTATTGCCATCAAGGATATCATACGACCCCCCAAAAAGGAGACCTTCAATGATGTGTACATTGTTTATGAATTGATGGACACTGATCTTCATCATATAATTCATTCTGACCAACCTCTTAGTGAAGAACATTGTCAGTACTTCTTATACCAGCTGTTACGGGGGCTTAAATATGTTCACTCGGCTAACGTTTTGCACCGTGACCTTAAGCCCAGTAACTTACTAATGAATGCAAACTGCGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACAACATCTGAAACGGATTTCATGACAGAGTATGTTGTCACACGATGGTACCGTGCCCCAGAATTGCTCCTTAATTGTTCTGAGTATACCTctgcaattgatgtttggtctgttgggtgcatacttggtgaaattatgaccagagaacccttgttTCCTGGCAAAGACTATGTTCACCAACTAAGGCTTATAACGGAGTTATTAGGTTCACCTGATGATGCAAGCCTTGAATTTCTCCGAAGTGATAATGCCAGAAGATATATTAGACAGCTTCCACAGTACCGGAAGCAAAAATTCTCGACCAGATTCCCTAACATGTTGCCTAAGGCATTGGACCTGTTAGAAAAGATGCTGATCTTTGATCCAAACAAACGCATTACTGTTGATGAGGCATTATGTCACCCATATCTTTCATCACTTCACAACATCAATGATGAGCCAGTCTGTCCCAGGCCATTCAGTTTTGATTTTGATCAGCCAACATGCACCGAAGAGCACATGAAGGAGCTCATTTGGAAGGAATCAGTGAAGTTCAATCCAGATCCACCATGCTAG 1143 0.3981 MTTKGSSSSAASSASGDAKIKRVLTHGGKYAQYNVYGNLFEVSSKYVPPIRPIGRGVNGIVCAAVNSETHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHDNIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDQPLSEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLEFLRSDNARRYIRQLPQYRKQKFSTRFPNMLPKALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNINDEPVCPRPFSFDFDQPTCTEEHMKELIWKESVKFNPDPPC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00167 380 Gene3D Transferase(Phosphotransferase) domain 1 131 360 - -
Gma08g00167 380 SMART serkin_6 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00167 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 379 - -
Gma08g00167 380 ProSitePatterns MAP kinase signature. 82 185 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma08g00167 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Gma08g00167 380 ProSitePatterns Protein kinases ATP-binding region signature. 53 77 IPR017441 GO:0005524
Gma08g00167 380 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Gma08g00167 380 CDD STKc_TEY_MAPK 40 376 - -
Gma08g00167 380 Gene3D Phosphorylase Kinase; domain 1 30 370 - -
Gma08g00167 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 379 - -
Gma08g00167 380 Pfam Protein kinase domain 51 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00167 380 ProSiteProfiles Protein kinase domain profile. 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00167 Gma-Chr8 1436892 1439789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00167 6 376 MAP Kinase Gene Family AT4G01370 80.054 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma08g00167 Pkinase 1.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00167 - - gmx:100807109 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00167 08 1436892 1439789 Gma08g00167 08 1436892 1439789 ECH
Gma05g02064 05 41888423 41892137 Gma08g00167 08 1436892 1439789 GST
Gma01g02220 01 57419103 57422444 Gma08g00167 08 1436892 1439789 PCT
Gma11g00199 11 1557681 1560675 Gma08g00167 08 1436892 1439789 PCT