Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00158 ATGTCTTCTGATCTCTATGCTTTTGACACTACCTTATACTCACATTCAAACTCAGACTTGGTTTCCTCTGATGGAGTTAGAGACCTTCCTTTAATCTCAGAATCTTTTCCTTTCTTTGCCAATTCTCAAGAGAATTGCAATAATAATGCTCTTTCTAACGCTCTCGACCCATTTTCCCCTTCTTTTTTCTCTTTCTCCCCTCCAAGTTCCCACTTGGAAAGCCTTAGTCTTTATCATGCTAACCGCTTGCAGTCTCTGTCAAATGGCCAAAACTTGGCAAATGAATTTGGGAGTTTCTCAGCTTTTGATGGGTCAGAAATGAAAACTGAGGAATGCCAAATGGGTGGTGATTATGCATACAGTCAGCAACTCCTTCCTCACAGTTATAGTGGTGCTGAGAATTTTTCCAAGTACATGCAGAGGAGCTTCAGCAGCAACTCATACGAAGGGAAACCAGCTTACAGTGACCCTCGCGAGGATTCTCCAAAATTTCAAAGGCATGAGATGAGTTCCCCTGAAGACAACACTGTCTTTGGTGGACAAATGAGAAGGGTTTGCAGCACAGGCGATTTGCAGGAATCGAACTTCAAAGTAGGGCGTTACAGTGCGGAGGAAAGAAAAGAAAGAATTTCTAAATACAGAGCCAAGAGAAACCAGAGGAACTTCAACAAAACCATTAAGTATGCATGCCGAAAAACACTAGCAGATAATCGACCACGCATTCGTGGCAGATTTGCCCGCAACGACGAGTCCAGCGAGACTCTCAAGGTTTCATGTTCTACCCGAGATGAAGATGATGTCGATTTCTGGATTGAAGAGTTGCGATTGCATGAAGAGCAAGACGATGTAACAGTGGGAGCAGAACAGTACTTGAGAAATTATGGAGCTAGCCAGTTTCAATACGGTGGCTTTTGA 915 0.4328 MSSDLYAFDTTLYSHSNSDLVSSDGVRDLPLISESFPFFANSQENCNNNALSNALDPFSPSFFSFSPPSSHLESLSLYHANRLQSLSNGQNLANEFGSFSAFDGSEMKTEECQMGGDYAYSQQLLPHSYSGAENFSKYMQRSFSSNSYEGKPAYSDPREDSPKFQRHEMSSPEDNTVFGGQMRRVCSTGDLQESNFKVGRYSAEERKERISKYRAKRNQRNFNKTIKYACRKTLADNRPRIRGRFARNDESSETLKVSCSTRDEDDVDFWIEELRLHEEQDDVTVGAEQYLRNYGASQFQYGGF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00158 304 MobiDBLite consensus disorder prediction 146 179 - -
Gma08g00158 304 MobiDBLite consensus disorder prediction 153 170 - -
Gma08g00158 304 PANTHER CCT MOTIF FAMILY PROTEIN 7 301 - -
Gma08g00158 304 Pfam CCT motif 206 248 IPR010402 GO:0005515
Gma08g00158 304 ProSiteProfiles CCT domain profile. 206 248 IPR010402 GO:0005515
Gma08g00158 304 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 7 301 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00158 Gma-Chr8 1343321 1345327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00158 202 254 C2C2-CO-like Transcription Factor Family AT5G24930 49.057 6.79e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma08g00158 CCT 5.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00158 - - gmx:100816547 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00158 08 1343321 1345327 Gma08g00158 08 1343321 1345327 ECH
Gma05g02055 05 41799779 41801637 Gma08g00158 08 1343321 1345327 GST
Gma01g02211 01 57336839 57338351 Gma08g00158 08 1343321 1345327 PCT
Gma11g00207 11 1636692 1638695 Gma08g00158 08 1343321 1345327 PCT