Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00155 ATGGAAGAATGGTCAACATTCTCAAATGGGTCTTCCTTAGATTGCATTGGAGGAGTTGAACTTGAAACTGTTGGTGCATTTCCTGGAAATGGCTGTGGCCTTGGAAAGCACCATGTTGATAATGGTGCTGACAATGGCAAACTTAAACAGAAGTACTTGTTCTACCAACTGTTTCCTGCTTACCTGAAGGATAGTTGTTCCAAAGGTGGTGTTCGGCCTTTGCCAGTTTTAGTCGACGGTCAATGGCTGGATTTGTACAAACTGTTCTTCCTGGTAAAGGAAAGAGGTGGGTACGCCCGAGTGTCGAAGAAAAGATTGTGGGGTTCTGTGACCAAGGAATTGGGCTTGAACCTTGTGGTTTGCTGGTCTGTAAAATTAGTCTATGACAAGTATCTGAATGATTTCGAGAGGTGGCTCAAGAAAACTTTTGAAGAGAAGAATTTAAAAAGCGGGAACCATGGGTGTGATTGGGGTTTAAAGTGGTTGCCATTCGATATTGAGAAAGAGTTTAGAGCCCTGTTATGTCCAAATCTAAAGGACAAAGATGATCACAAACTTGTCAAGTCAAAATCAATTAATAAAAAGAAAAACACTGATTTGGTTAACCACAAGAATGGTAATAATCTGTTGGACACCAAAGATCAAAATAATAAATCCGAGGATGTTCAACGCATTGAAGGTGATAATGATGAAAAATCAACTAATGGTGTTAAGGACAATCCTGCTACCTTGGGTGCAGAAGGTGCCAAGAAAGAATTTAACCCACACAAACGCAAGCGGGATGCATTGTCTGGCATGCTAAACTGGATGAAGCATGTTGCAAAGCATGCTCTTGATCCTTTAACTCAACCAATACCTAAACCATCAAAGTGGAAGGAATATAAAGGCCAGGACTTTTTTGGTCAATTTCTGAGGGCAAGAGAGGTTCTGTCACCGAGACAGCATGAAGAACCAAGCAGTGAATTGTCTTCTTTGCAGAAACAGAAGATGCACCCTGCCATGTATGAGGATCATGTTGCTCTTGGTTGCCATGCTACAAGAAAATTGAGATGCAGTGAAAGGTTGCCGTCCTTTGTTAAATCTCGGTCGTGCTCGTGCTGCAATCCATGTTCCCCCAACGGAAATAGATTGACAGGCTCACACATTATGGAGGCAGAAAAATGTCCTCTGGAGAAAACAACTGAAACACCAGATGTATCAACCACAATAACAATAGCTAAGCCATCTGGGGATGAGTCTCTCGAAAAGCAAGTTTCTGTAGGTCCTCGTTTTCAAGCAGAAGTCCCAGAATGGACTGGTGTATTTTCTGAGAGTGACTCTAAATGGTTGGGCACACATGTATGGTCTTTGAAAAATGACACTGAACCTGCTACAGCAACAGATGTTGGGAGAGGAAGACAAGAGATGTGTAGCTGTGAATTTCATGGTTCTGTTGAATGTGTTAGATTGCATATTGCTGAAAATAGGATGAAATTGAAGCTTGAATTGGGTTCTGAATTTTACCGTTTGGGATTTGATCGTATTGGTGAGGAAGTTTCACTTCAATGGACAACTGAAGAAGAACAGAGATTTAAGGATATCATGAAATCAAATATTTCCTCCAAAAATAAATATTTTTGGAACAATCCATCCAAATACTTTCCAAAGAAGACAAGAAGAAACTTGGTGAACTATTACTTCAATGTATTTCTTATTCAACTAAGAACCTATCAGAATCGGGTGACTCCAGAGAGCGTTGATAGTGATGATGATGAAGTAGAATTTGGATCTTTCAGCGATGGTTTTGGGATGGACGCTGTCAAGAGTCTTGGTGATGATTTCCTGGAGTGTTCTCTGAACAAGCAGTGTACTGATCTCAAATACACAAAATTAGAGTGCAAATTTGATAATTGGATCTGA 1899 0.4049 MEEWSTFSNGSSLDCIGGVELETVGAFPGNGCGLGKHHVDNGADNGKLKQKYLFYQLFPAYLKDSCSKGGVRPLPVLVDGQWLDLYKLFFLVKERGGYARVSKKRLWGSVTKELGLNLVVCWSVKLVYDKYLNDFERWLKKTFEEKNLKSGNHGCDWGLKWLPFDIEKEFRALLCPNLKDKDDHKLVKSKSINKKKNTDLVNHKNGNNLLDTKDQNNKSEDVQRIEGDNDEKSTNGVKDNPATLGAEGAKKEFNPHKRKRDALSGMLNWMKHVAKHALDPLTQPIPKPSKWKEYKGQDFFGQFLRAREVLSPRQHEEPSSELSSLQKQKMHPAMYEDHVALGCHATRKLRCSERLPSFVKSRSCSCCNPCSPNGNRLTGSHIMEAEKCPLEKTTETPDVSTTITIAKPSGDESLEKQVSVGPRFQAEVPEWTGVFSESDSKWLGTHVWSLKNDTEPATATDVGRGRQEMCSCEFHGSVECVRLHIAENRMKLKLELGSEFYRLGFDRIGEEVSLQWTTEEEQRFKDIMKSNISSKNKYFWNNPSKYFPKKTRRNLVNYYFNVFLIQLRTYQNRVTPESVDSDDDEVEFGSFSDGFGMDAVKSLGDDFLECSLNKQCTDLKYTKLECKFDNWI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00155 632 SMART ARID_2 45 136 - -
Gma08g00155 632 SUPERFAMILY ARID-like 55 142 IPR036431 GO:0003677
Gma08g00155 632 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 619 - -
Gma08g00155 632 Pfam ARID/BRIGHT DNA binding domain 58 136 IPR001606 GO:0003677
Gma08g00155 632 Gene3D - 36 151 IPR036431 GO:0003677
Gma08g00155 632 CDD ARID 54 136 - -
Gma08g00155 632 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 619 - -
Gma08g00155 632 MobiDBLite consensus disorder prediction 194 247 - -
Gma08g00155 632 ProSiteProfiles ARID domain profile. 48 140 IPR001606 GO:0003677
Gma08g00155 632 MobiDBLite consensus disorder prediction 214 235 - -
Gma08g00155 632 SMART bright_3 49 141 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00155 Gma-Chr8 1310116 1316708 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gma08g00155 ARID 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00155 - - gmx:100816021 1294.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00155 08 1310116 1316708 Gma08g00155 08 1310116 1316708 ECH
Gma05g02051 05 41762997 41770082 Gma08g00155 08 1310116 1316708 GST