Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00148 ATGCGGTTGTGGTGGGGAAAGTCTTCTTCCAAAGAGTCGAAGAGGAAGGCAAACAAGGAAACTATTATTGATACAATACAGCGGAAATTAAAGAATACTTCTGAAGAGAAGTGCAACAATAAATCAGGAAGGTCAAGGAGACATCATGATGATGCCATATCTAAGAAGGGTTCTAGATCTCTCACACCTTCAACATCAGCATCACCCTCAACACATGTGTCTCGCGTTCCAAGTTTTACAGAAAGGCCTCTTTCTCAACCACTCCCATTACCAGGGTCACATCTTCCAGCTGCCATTGATGTAAGTTCTGGAGTTATTTTAACATCAAAACTGGAAAGAGCCATAGGCTCTAAGCTATCTCTGAATTTTCCTCTTCAAAAACCTGGCTATGTATCAAACAAGGAAGATCCTACAGATGCAGCAGGAGATATAGCCTCTGCATCTGTTTCTAGTGACAGCTCAATTGATAGTGGCAACTCATTTGATTCGCCACATCTTGTTAGTCCACTGGCATCTGACTGTGAAAATGGAAACCCAGCCACCATTAATAGTTCTTTAAGTGTGGTGCACAGGAATCAGTCACTTATTACTATCCAAAGAAACTCAAGAGCATCCTCAAAATCATCTCCTCAGTTGTGCAATAATAAAACTTCATCAACCTCACCAAGAGGGGCTCCATTACATCTGCAAAATCTGAAAATAGCTCAACCAGGTGGTTTGTGTAGTGCTCCAGATAGTTCAGTGTCAAGTCCTTCTAGAAATCAAATGGGAGCATTTGGACCTGAGCAAATGTTGAACTCTGAATTACACACAGGAAAGCCTTATCCAGATATACCTTCTGGGCGCTGCTATAATCCAGTTTCGGGTCGTGATTCTGGTCATAATTCAGTTGGGGGGGATATTTCAGGACAGATGATTTTGCCACAGAACAAGCGTAGCCCTGAGTGTTCTTCAATACCTAGTCCCAGAATTACAAGCCCTGGTCCCAGTTCCAGGACACAGAGTGGTACTGTGACCCCTCTGCATCCTAAAGCTGGAGGCGCTGCAGCAGAAGCACCTACAAGACGTCCTGATGATGTGAAACAAAAAAATCATCAGTTAGCAATTCCTCCAATAACAGCCACTAAATCTTGTCCATTTTCTCCAACCTATTCTGCATTGACAACTCCTTCAGCCCCTCGTAGTCCTGGCAGATCAGAAAATTCATCAAGCCCAGGTTCACGCTGGAAAAAGGGGCAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGAGAATGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTTTCTGATGATGCTAAATCAAGGGAAAGTGCGCAGCAACTTGGCCAAGAAATTGCAATGCTTAGTCAGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGGTAGATGACAGACTTTATGTATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGCTGGTTAAAGAATATGGCCAGTTAGGTGAAATTGCTATTCGTAATTATACTCGGCAAATTCTATTAGGACTTGCGTATTTGCACACCAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAGTGGGCGGATAAAATTGGCAGATTTTGGGATGGCAAAGCATataagcgggtcctcttgtccattttctttcaaaggaagtccttactggatggcacctgaggttataaaaaattcaaatggttgtaatcttgcggttgatatatggagtctaggatgcactgttttggagatggcaacaacaaaacctccttggagccaatatgaagggGTTGCTGCTTTGTTTAAGATTGGGAATAGCAAGGAACTTCCTACAATTCCAGATCATCTATCAGAAGATGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCTCTAAATCGTCCCTCAGCTGCTCAACTTCTAGATCATCCATTTGTTAAAAATGCTATGCTGGAAAGATCCATTTTAACTGCCGTTCCTTCAGAAGATCCAACTGCCATAATAAATGCAGTGAGATCTCTGGCCGTTGGACCTGTAAAACATAATTTATGCTTAGACTCAGAAGTGGCTGGGATCTATCCACTCAGAAGCTTGAGAACTGGTTCTGGATCAAGCAATGCTCATACACCAAGGAACATCTCTTGTCCCGTTTCTCCCTCTTTGCCTTATAAATCATTGCATAGAAGTGGAAGAATGTCTCCTTCtccaatacccagccctaatactgcatctggctcatcttcaccactaaccagtggtggcggtgctattccatttcatcagacaaagcaaccactattttcacatgaagttGGGTCTAAGCATGAGCAGTTTGGGAGAAACTTGCAAACTACACATCCTTGCTGGGATGTAGTTTCATCTGATAATGATGCTCTTCCAAACCATTCCAGGAGGGCTGTCCAGGGAGACCCAATAAAATTTCGTGATGAGAAGTCATGCTTGGCTGATTGTGTGTCACAGCAACTGTTGAGGGATTATGTTCGCCTAAATGCATGCCTTGATAATAAGCTCAATACCCCAAATCCTGATTGCATTAATGGCTTGTGA 2625 0.3817 MRLWWGKSSSKESKRKANKETIIDTIQRKLKNTSEEKCNNKSGRSRRHHDDAISKKGSRSLTPSTSASPSTHVSRVPSFTERPLSQPLPLPGSHLPAAIDVSSGVILTSKLERAIGSKLSLNFPLQKPGYVSNKEDPTDAAGDIASASVSSDSSIDSGNSFDSPHLVSPLASDCENGNPATINSSLSVVHRNQSLITIQRNSRASSKSSPQLCNNKTSSTSPRGAPLHLQNLKIAQPGGLCSAPDSSVSSPSRNQMGAFGPEQMLNSELHTGKPYPDIPSGRCYNPVSGRDSGHNSVGGDISGQMILPQNKRSPECSSIPSPRITSPGPSSRTQSGTVTPLHPKAGGAAAEAPTRRPDDVKQKNHQLAIPPITATKSCPFSPTYSALTTPSAPRSPGRSENSSSPGSRWKKGQLLGRGTFGHVYLGFNRECGEMCAMKEVTLFSDDAKSRESAQQLGQEIAMLSQLRHPNIVQYYGSETVDDRLYVYLEYVSGGSIYKLVKEYGQLGEIAIRNYTRQILLGLAYLHTKNTVHRDIKGANILVDPSGRIKLADFGMAKHISGSSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAALFKIGNSKELPTIPDHLSEDGKDFVRLCLQRNPLNRPSAAQLLDHPFVKNAMLERSILTAVPSEDPTAIINAVRSLAVGPVKHNLCLDSEVAGIYPLRSLRTGSGSSNAHTPRNISCPVSPSLPYKSLHRSGRMSPSPIPSPNTASGSSSPLTSGGGAIPFHQTKQPLFSHEVGSKHEQFGRNLQTTHPCWDVVSSDNDALPNHSRRAVQGDPIKFRDEKSCLADCVSQQLLRDYVRLNACLDNKLNTPNPDCINGL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00148 874 MobiDBLite consensus disorder prediction 291 413 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 198 225 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 7 56 - -
Gma08g00148 874 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Gma08g00148 874 Coils Coil 16 36 - -
Gma08g00148 874 Gene3D Transferase(Phosphotransferase) domain 1 407 689 - -
Gma08g00148 874 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 805 - -
Gma08g00148 874 ProSiteProfiles Protein kinase domain profile. 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00148 874 MobiDBLite consensus disorder prediction 57 81 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 132 160 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 291 340 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 1 89 - -
Gma08g00148 874 Pfam Protein kinase domain 410 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00148 874 MobiDBLite consensus disorder prediction 144 160 - -
Gma08g00148 874 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 805 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 751 777 - -
Gma08g00148 874 SUPERFAMILY Protein kinase-like (PK-like) 407 751 IPR011009 -
Gma08g00148 874 MobiDBLite consensus disorder prediction 720 778 - -
Gma08g00148 874 CDD STKc_MEKK1_plant 408 665 - -
Gma08g00148 874 MobiDBLite consensus disorder prediction 720 738 - -
Gma08g00148 874 SMART serkin_6 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00148 874 MobiDBLite consensus disorder prediction 368 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00148 Gma-Chr8 1244233 1250252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00148 4 857 MAP Kinase Kinase Kinase AT1G63700 56.236 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma08g00148 Pkinase 1.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00148 K20717 - gmx:100814422 1529.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00148 08 1244233 1250252 Gma08g00148 08 1244233 1250252 ECH
Gma08g00148 08 1244233 1250252 Gma04g02054 04 50982457 50988122 PCT
Gma08g00148 08 1244233 1250252 Gma06g01363 06 12843551 12849512 PCT