Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00139 ATGTCTGGATGCAAGAAATCACCAAAAAATGATCAACAATCAATCAAATATTGGCGGATTCAACACGGAGGGGCATCCTCTGAGGCTGATCTTTCTTGTGTAGATTATTCGCAATCTCTTTCCACCAATGAGAACAAGCAATGCCATGGAAGTTCTCAACCAAAGTCCCCTCAGATACTGAGCACAGCTCAGCTCATCTCAGCTATAGGCCAGATATGGGATTCTGCCAGTCGCCCGCTTTCGGTTTTACTCCCAAAGGATAATGTGAATCAGGATGATAAAGGATTCCAGAAAGAAAAAATTCTGGATAGCGTTGATGAGAAAAAAAATGACTTGGTATATGCGTCAAGTGACATTAAGTACTATCCTGTTACCAAGGGTGGTGGTGCAAAGATTGTGCAGGGAAAATTGGATTTCCCTAAGGTAATGCAGAAGATATCAGTACTTGACTCTTCTAATGACAGTCAAGATTATATTCATTCTTTATTTCAGAGGTGTTTGCAGGCTAGTGATAAAAATACAAATCAAGATTGGAAAGAAATGGAACTTAGGAGGGAGGAAATGTCTTGTATATCAGGAAATGTATTTTGGTGGGTAGGTAGGAATATTACTAAGGCGCTAAATTGTCAAGTGAATGCTACCCGACCTGAGAACCTGGAAACTAATGCTCCAGTTGCTGGGGGTAACATTTCAGTAGACACAAGCACCCCCACATTGGCTAATGAGAGTGATGTGTGTAGTCCTAATTCAATCACACATGAAACTCAATCATTATCTAATGCTGCAATTCTGAACTCAAGAATAGTTAGCCCTCTTTGTTCAGACTATTTTCTTCAAGCTGTGCCTGATACTAAGGCAGACGCTGGTGCTTGTCAGATCCTTTATTCTAGTATCTGTGCGGACTATCATATTTACTCTCTAGCTTCATATAATAGTGCGTCTGATCAGTGCCAACATGAGATTGATGATAATGAATCTCAGGAAATCCAAAGAAAGCATTTCTTGGATATAACTGATGATAAACCTAAGGTTCAGATCGCTGCAACCCACCTAAAACCTTGTAATTCCCAAGCCAAACAAGAACATGCTTTTTCTGGGGCGTTAGCTGGTGTATGTGTCAGCCTTTGTCTGCATCCTGTTGACACAATTAAAACAGTCATTCAAGCATGCCGTGCTGAACACAGGTCCATCTTTTACATTGGGAAGTCAATTGTTTCTGATAGAGGTTTGCTTGGACTGTATCGTGGAATTACCACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCTCCTATGAATCAGTTAAGGCAGCTTTGCTTCCTCATCTTCCAAAGGAGTATTGTTCTTTTGCCCATTGCGTGGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCCAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTTTTCCTCCCTATATGCAGGTTGGAGAGCTGTACTATTCCGGAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTAGTATTCAACCCAACTCGTTTAAGACTGTAGTGTGTGGAGGATTAGCTGGATCTACGGCTGCTTTATTCACGACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGGTCTGCAAATCAATATGATAGTGTGCTCCATGCCCTTTACAAAATTAGTAAGAGTGAAGGATTGAAGGGCCTGTACAGGGGGTTGATTCCGAGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCTTCATATGAATTTTTCAAGAGGACATTTTCTCTGGAAGCACCATATCCCACTGATTTATGCATTCAGGACAATGATGGGAATGCTGAAGAGTGA 1953 0.4096 MSGCKKSPKNDQQSIKYWRIQHGGASSEADLSCVDYSQSLSTNENKQCHGSSQPKSPQILSTAQLISAIGQIWDSASRPLSVLLPKDNVNQDDKGFQKEKILDSVDEKKNDLVYASSDIKYYPVTKGGGAKIVQGKLDFPKVMQKISVLDSSNDSQDYIHSLFQRCLQASDKNTNQDWKEMELRREEMSCISGNVFWWVGRNITKALNCQVNATRPENLETNAPVAGGNISVDTSTPTLANESDVCSPNSITHETQSLSNAAILNSRIVSPLCSDYFLQAVPDTKADAGACQILYSSICADYHIYSLASYNSASDQCQHEIDDNESQEIQRKHFLDITDDKPKVQIAATHLKPCNSQAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQACRAEHRSIFYIGKSIVSDRGLLGLYRGITTNIACSAPISAVYTFSYESVKAALLPHLPKEYCSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGFSSLYAGWRAVLFRNVPHSIIKFYTYESLKQVMPSSIQPNSFKTVVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGLKGLYRGLIPRLIMYMSQGSLFFASYEFFKRTFSLEAPYPTDLCIQDNDGNAEE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00139 650 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 644 - -
Gma08g00139 650 ProSiteProfiles Solute carrier (Solcar) repeat profile. 450 533 IPR018108 -
Gma08g00139 650 SUPERFAMILY Mitochondrial carrier 361 625 IPR023395 -
Gma08g00139 650 ProSiteProfiles Solute carrier (Solcar) repeat profile. 540 628 IPR018108 -
Gma08g00139 650 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 644 - -
Gma08g00139 650 Pfam Mitochondrial carrier protein 541 630 IPR018108 -
Gma08g00139 650 Pfam Mitochondrial carrier protein 361 442 IPR018108 -
Gma08g00139 650 Pfam Mitochondrial carrier protein 453 534 IPR018108 -
Gma08g00139 650 Gene3D Mitochondrial carrier domain 452 642 IPR023395 -
Gma08g00139 650 Gene3D Mitochondrial carrier domain 304 451 IPR023395 -
Gma08g00139 650 ProSiteProfiles Solute carrier (Solcar) repeat profile. 357 441 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00139 Gma-Chr8 1171121 1174617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00139 365 629 Chloroplast and Mitochondria Gene Families AT1G07030 33.213 1.95e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00139 - - gmx:100812271 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00139 08 1171121 1174617 Gma08g00139 08 1171121 1174617 ECH
Gma05g02034 05 41625584 41629174 Gma08g00139 08 1171121 1174617 GST