Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00134 ATGGGTTGTGACTTTTCCAAGTACACAGTGTGCTGCACGGGTACGGAGCAAGATGGTCCGGCTGCTGAGGCTCAGGTTGATGGTGGAAACGAAGACAATGTTGTTGAGGGCGTTGACTTGCCGCGGTTTCATGAATTCACAATTGAACAGCTTAGGAGGGCTACATCCGGATTTGCCATTGAAAATATAGTTTCTGAACATGGAGAAAAGGCTCCAAATGTGGTCTATAAAGGGAAACTTGATAATCAGATGCGAATTGCTGTCAAACGGTTCAACAGAAATGCTTGGCCTGAAGCGCAACCATTTTTGGAGGAGGCTAGGGCTGTTGGTCAGCTAAGGAACCAAAGATTGATAAATCTGCTTGGATGTTGTTGTGAAGGTGAAGAAAGGTTACTTGTTGCAGAATATATGCCCAATGATACTTTGGCAAAGCATTTATTCCATTGGGAAACTCAGCCCATGAGATGGGCAATGCGAATGAGAGTTGCTCTGTGCCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCTCTATATCATGATCTGAATGCTTACAGAGTTCTTTATGATGATGAATACAATCCTAGACTTTCATGCTTCGGTCTGATGAAAAATAGTAGAGATGGGAAAAGTTACAGTACAAATTTGGCATTCACTCCACCTGAATATCTGAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGAACCCTTTTGCTTGACCTCCTCAGTGGCAAGCATATTCCTCCAAGCCGTGCCCTTGACCTAATTAGAGACAAGAACCTTCAAATGCTATCAGACTCTTGCTTAGAAGGAGAGCTTACAAATGATGATGGGACTGAATTAGTGCGTCTAGCCTCACGATGTTTGCAATCTGAACCACGAGAGCGTCCTAATCCAAAGTCACTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTAATGTGTTGATGGGTATCCCAGATGGTACAGCTGGTTTTCCCCTTTCACCTCTTGGAGAAGCTTGTCTACGAATGGATCTGACTGCCCTGCATGAGGTGATGGAGAAAATTGGGTATAAAGATGACGAGGGTGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAAGGGGACGCTGCTTTTCGGCACAAGGATTTTAAAACTGCAATTGATAGCTATACGATGTTCATTGATGTTGGAACCATGGTTTCTCCAACGATTTATGCACGTCGTAGTCTATGTTATCTGATGAGCAATATGCCCGATGAAGCACTTAATGATGCGATGCAAGCACAAGTAATATCCCCCGTTTGGTACATTGCGTTTTATTTACAAGCTGTTGCTCTTTTAGCACTGGGCAAGGAGAATGATGCCCAGGTGCCACTTAAAGAGGGTTCTTCGCTTGAAAATAAAAAGAACACAAATTAG 1470 0.4388 MGCDFSKYTVCCTGTEQDGPAAEAQVDGGNEDNVVEGVDLPRFHEFTIEQLRRATSGFAIENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLINLLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDEYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSRALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSLVAALIPLQKDSEVPSNVLMGIPDGTAGFPLSPLGEACLRMDLTALHEVMEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSPTIYARRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVPLKEGSSLENKKNTN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00134 489 SUPERFAMILY Protein kinase-like (PK-like) 41 320 IPR011009 -
Gma08g00134 489 SUPERFAMILY TPR-like 388 482 IPR011990 GO:0005515
Gma08g00134 489 Gene3D Phosphorylase Kinase; domain 1 34 136 - -
Gma08g00134 489 ProSiteProfiles Protein kinase domain profile. 61 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00134 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Gma08g00134 489 Gene3D Tetratricopeptide repeat domain 371 483 IPR011990 GO:0005515
Gma08g00134 489 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Gma08g00134 489 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Gma08g00134 489 PANTHER TPR DOMAIN KINASE 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00134 Gma-Chr8 1116648 1127843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00134 46 337 Glycoside Hydrolase AT3G07070 33.438 5.90e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gma08g00134 PK_Tyr_Ser-Thr 9.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00134 K14500 - gmx:100819210 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00134 08 1116648 1127843 Gma08g00134 08 1116648 1127843 ECH
Gma05g02030 05 41576264 41586541 Gma08g00134 08 1116648 1127843 GST