Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00129 ATGGCGACCAAGTTTTTAGCTTTAGCTTGTTTACGTAACAATGAGGGGTCGGGGTACCTATCGCCACGACCTCACTACCCGTCGATGCCGAAATATCCAAAGGGAGTGACAGAAGAAGAAGGAAGCAGTAACATATCGTCCAAGGCACTTTTCTCCGTCGTCGGAATGACTTGCTCCGCCTGTGCTGCCTCCGTCGAGAAAGCCGTCAAGCGTCTTCCCGGAATTCGCCAAGCCGTCGTTGATGTTCTCAACAACCGTGCCCAAGTCCTCTTCTATCCATCCTTTGTTAACGAAGAGACCATTCGAGAGGTCATTGAAGATGCTGGATTCCAAGCCACATTCATCAGAGATGATAACGAGACATCTGTTCAGATATGCCGCATACGTATCCAAGGCATGACATGCACGTCGTGTTCCTCCACCGTCGAATCCGCTCTACAATCAATCCAAGGAGTGGTGAAAGCCCAAGTGGCTCTTGCAACTGAGGAAGCTGAAGTTCACTACACTCCAAACGTTGTTACCTACAACCAAATCTTGGAAGCTGTTGAAGACACGGGCTTTCAGGCCACGCTTATAAGCACAGGCGAAGACATGAGCAGAATAGACCTTCAAGTTGAAGGCATAAGAACTGGTCGTTCCATGAGACTCATTGAAAATTCTCTTCAGGCCCTCCCTGGGGTCCAAGGTGTAGAAACACACCCTGAGTTCAACAAAGTGTCTCTTTCTTATAAACCAGACTTGACAGGACCTAGAAATTTCATCAATGTGATTGAAGAAACGGGATCTAGGCGTTTCAAGGCGAAGATTTTCCCTGAAGAAGGAGGAAGAAGGAATAGTCATAGGAGGGAGGAAATCAGGCAATACTATAGATCTTTCTTGTGGAGTTTGGTGTTTACTATTCCTGTGTTTCTAACCTCTATGGTGCTTATGTATATCCCTGGAATTAAGCATGGAGTAGATGCTAAAGTTGTGAACATGCTTACAGTGGGGGAGATTATAAGATGGGTGCTTGCTACACCAGTGCAGTTCATTATAGGGAAGAGGTTTTATTCTGGTGCTTACAAAGCATTACGCCTTGGCTCTCCCAACATGGATGTTTTGATTGCCTTGGGGACAAACGCAGCATACTTTTACTCAGTGTATTCTGTGCTGAGAGCTGCTACATCGCAGGGTTTCAAGGGGACTGATTTCTTTGAGACTAGTGCTATGCTTATTTCGTTTATTTTGCTAGGGAAGTACCTTGAGGTTTTGGCCAAGGGCAAGACGTCCAATGCAATTGCCAAGCTCATGAACTTGACACCTGACACTGCTATACTGTTGACCCTGGACAGTGAAGGAAATGTTGTTGGTGAAGAGGAAATTGATAGCAGGCTGATTCAGAAGAATGATGTGATTAAAGTTATTCCTGGTGCAAAGGTGGCTGCGGATGGATTTGTTATTTGGGGTCAGAGCCACGTGAATGAGAGCATGATTACAGGTGAGGCACGTCCTGTGGCTAAGAGGAAAGGTGAAACTGTTATTGGAGGAACTGTGAATGAGAATGGAGTGTTGCATGTTAAGGCTACCTGGGTTGGATCAGAGAGTGCTCTTTCTCAGATTGTTAGACTTGTTGAGTCAGCACAGATGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGCATTTCTAAATACTTTGTGCCTCTGGTAGTTATTTTAATCTCATTTTCAACTTGGCTTGCATGGTTTTTAGCTGGAAGATTTCATGCTTACCCCAAGTCTTGGATACCATCTTCCATGGATAGCTTTCAGCTTGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCTTGTCCATGTGCTTTAGGTTTAGCAACGCCAACTGCTGTTATGGTTGGCACTGGAGTAGGTGCATCTCAGGGAATACTTATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGTGTTGTATTTGACAAAACAGGTACTCTCACAATCGGGAAGCCTGTGGTAGTAAATACAAAGTTGTTGACAAATATGGTACTCCGGGAATTCTATGAACTTGTGGCTGCAGCTGAGGTGAATAGTGAACATCCACTGGCTAAGGCCATAGTTGAGTATGCCAAAAAACTGAGAGATGATGAGAACCCCATTTGGCCAGAGGCACGGGATTTTGTGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAACAAGGAAATACTTGTGGGTAACAAGAGCTTGATGGAAGACCACAATGTTGCACTTCCCATCGATGCTGAAGAGATGCTTGCAGAAGCAGAAGCAATGGCTCAAACTGGAATTATAGTGTCTATTAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGCTGCACAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGGGACAATTGGGGAACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACAGTTATTGCTGAGGCCAAACCAGATCAGAAAGCAGAGAAAGTGAAGGACTTGCAGGCTTCTGGGTACAGGGTGGCTATGGTGGGGGATGGTATCAATGACTCGCCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATTGGTGCTGGTACAGACATTGCTATTGAGGCTGCTGATATTGTCCTAATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACGTTTTCTCGTATCCGCCTCAACTACATATGGGCTTTGGGCTATAATCTACTTGGCATTCCAATTGCTGCTGGAGCTCTTTTTCCTTCTACACGATTTCGGTTGCCACCATGGATTGCTGGGGCTGCCATGGCTGCATCTTCTGAAGATATAAAGCTATTAAAGCCAACAAAGCAAAGCCAGAAACCCAAGGCTCAAGCCTGA 2925 0.4523 MATKFLALACLRNNEGSGYLSPRPHYPSMPKYPKGVTEEEGSSNISSKALFSVVGMTCSACAASVEKAVKRLPGIRQAVVDVLNNRAQVLFYPSFVNEETIREVIEDAGFQATFIRDDNETSVQICRIRIQGMTCTSCSSTVESALQSIQGVVKAQVALATEEAEVHYTPNVVTYNQILEAVEDTGFQATLISTGEDMSRIDLQVEGIRTGRSMRLIENSLQALPGVQGVETHPEFNKVSLSYKPDLTGPRNFINVIEETGSRRFKAKIFPEEGGRRNSHRREEIRQYYRSFLWSLVFTIPVFLTSMVLMYIPGIKHGVDAKVVNMLTVGEIIRWVLATPVQFIIGKRFYSGAYKALRLGSPNMDVLIALGTNAAYFYSVYSVLRAATSQGFKGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLTLDSEGNVVGEEEIDSRLIQKNDVIKVIPGAKVAADGFVIWGQSHVNESMITGEARPVAKRKGETVIGGTVNENGVLHVKATWVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVVILISFSTWLAWFLAGRFHAYPKSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIGKPVVVNTKLLTNMVLREFYELVAAAEVNSEHPLAKAIVEYAKKLRDDENPIWPEARDFVSIAGHGVKAMVRNKEILVGNKSLMEDHNVALPIDAEEMLAEAEAMAQTGIIVSINREVVGVLAVSDPLKPAAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIETVIAEAKPDQKAEKVKDLQASGYRVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPSTRFRLPPWIAGAAMAASSEDIKLLKPTKQSQKPKAQA 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00129 974 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 404 938 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g00129 974 SUPERFAMILY HMA, heavy metal-associated domain 48 118 IPR036163 GO:0046872
Gma08g00129 974 Gene3D - 619 913 IPR023214 -
Gma08g00129 974 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Gma08g00129 974 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Gma08g00129 974 ProSiteProfiles Heavy-metal-associated domain profile. 125 191 IPR006121 GO:0046872
Gma08g00129 974 PRINTS P-type cation-transporting ATPase superfamily signature 781 792 - -
Gma08g00129 974 PRINTS P-type cation-transporting ATPase superfamily signature 803 813 - -
Gma08g00129 974 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Gma08g00129 974 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Gma08g00129 974 PRINTS P-type cation-transporting ATPase superfamily signature 879 891 - -
Gma08g00129 974 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Gma08g00129 974 CDD HMA 51 113 IPR006121 GO:0046872
Gma08g00129 974 Gene3D - 659 735 IPR023299 GO:0000166
Gma08g00129 974 Gene3D - 736 787 IPR023299 GO:0000166
Gma08g00129 974 PRINTS Copper-transporting ATPase 1 signature 148 169 - -
Gma08g00129 974 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Gma08g00129 974 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Gma08g00129 974 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Gma08g00129 974 SUPERFAMILY HMA, heavy metal-associated domain 195 262 IPR036163 GO:0046872
Gma08g00129 974 SUPERFAMILY HAD-like 651 957 IPR036412 -
Gma08g00129 974 CDD P-type_ATPase_Cu-like 290 955 - -
Gma08g00129 974 SUPERFAMILY HMA, heavy metal-associated domain 122 195 IPR036163 GO:0046872
Gma08g00129 974 SFLD p-type atpase 634 908 IPR044492 -
Gma08g00129 974 Pfam haloacid dehalogenase-like hydrolase 648 870 - -
Gma08g00129 974 ProSiteProfiles Heavy-metal-associated domain profile. 48 114 IPR006121 GO:0046872
Gma08g00129 974 PANTHER ATP7, ISOFORM B 1 956 - -
Gma08g00129 974 Gene3D - 419 541 - -
Gma08g00129 974 CDD HMA 128 190 IPR006121 GO:0046872
Gma08g00129 974 Pfam E1-E2 ATPase 450 630 - -
Gma08g00129 974 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 956 - -
Gma08g00129 974 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 364 955 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma08g00129 974 SFLD Haloacid Dehalogenase 634 908 - -
Gma08g00129 974 SUPERFAMILY Calcium ATPase, transmembrane domain M 396 936 IPR023298 -
Gma08g00129 974 ProSiteProfiles Heavy-metal-associated domain profile. 200 261 IPR006121 GO:0046872
Gma08g00129 974 Pfam Heavy-metal-associated domain 51 110 IPR006121 GO:0046872
Gma08g00129 974 Pfam Heavy-metal-associated domain 128 187 IPR006121 GO:0046872
Gma08g00129 974 ProSitePatterns Heavy-metal-associated domain. 130 159 IPR017969 GO:0046872
Gma08g00129 974 Gene3D - 46 119 - -
Gma08g00129 974 Gene3D - 124 196 - -
Gma08g00129 974 Gene3D - 199 261 - -
Gma08g00129 974 TIGRFAM TIGR00003: copper ion binding protein 128 189 IPR006122 GO:0005507
Gma08g00129 974 TIGRFAM TIGR00003: copper ion binding protein 50 112 IPR006122 GO:0005507
Gma08g00129 974 SUPERFAMILY Calcium ATPase, transduction domain A 451 537 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00129 Gma-Chr8 1092676 1098979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00129 1 969 Primary Pumps ATPases AT1G63440 75.356 0.0 1493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00129 K17686 - gmx:100810141 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00129 08 1092676 1098979 Gma08g00129 08 1092676 1098979 ECH
Gma01g02193 01 57183127 57187710 Gma08g00129 08 1092676 1098979 PCT