Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00125 ATGAAGTTATATACTTCATTGTTGTTACTTGGTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCATGATCCCTTCAGGTGAAGTGTTGGCACTTAAAACTTTCAAGGAAGCTGTGTATGAAGATCCACATATGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCTTTGTGACTGGAATGGTGTTTCTTGTACTGCAACTCGAGATCATGTCATCAAGCTTAATCTATCTGGGGCTTCATTAAGGGGATTTCTTGCTCCAGAATTTGGGAAAATTACCTACTTACAAGAACTGATCTTGCATGGAAACAGTCTCATTGGAGTAATACCTAAAGAATTGGGCATGTTGAACTCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAGTTATGAAAATAAACCTTCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAGCTAGGAAAGTTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTGGCAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCGGGTGTGaatatgactggcttctgtcgtttgtctcagttaaaagttgcagatttttcatataacttttttgttggtagcatacccaaatgcttggcatatcttccaagATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGCGGATTTCGGTGCAATGTGCTGGTGCTTCGCCTGCCCAAAGCGGACCAGTAGTGAACCCAAGGTACCTACCTGCTACTAAACATGTGACCAAGCATCAAGAAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTATTATTGCTATTCTCTCTGCGATTCAGAGGTGTAACAACAAACCATCTATCATCATTCCTTGGAAAAAATCTGCAAGCGGAAAAGATTATATGGCAGTACATATAGACTCTGAGATGTTGAAGGATGTGATGAGTTATAGCAGACAGGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGATAGTGTGGTCTACAAGGGTACCATGAAGGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAAGATAATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGATAACACAGGAAAGCTGTTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAATGGAACACTTTATGAGCACCTACATTGTTATGAAGAAGGGTGCCAGTTGTCTTGGACAAGGCGTATGAAAATTATCATAGGCATTGCCCGTGGACTCAAGTATTTGCACACTGAAATTGAGCCGGCGTTCACTATCTCAGAATTGAATTCCAATGCCGTTTACCTCACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCCGAAAAAAATTCTGGTAATGTTAGTAGCCAGGGTGCTGTTTGTGTTCTACCAAACTCTCTTGAAGCGCGCCGTCTCGACACCAAAGGAAACATCTATGCTTTTGCTGTACTTCTATTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCTAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAACATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAATCCTGATCACTCTGTCCGTCCATCAATGCGTGAATTATGCACTATGTTGGAGAGCAAAATAGACACAACAATAAATTTGGAGCTAAAGGCATCATCACTGGCTTGGGCTGAACTAGCACTTTCGTCATAA 1989 0.3982 MKLYTSLLLLGLVSMLSFVASVMIPSGEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLNSLKVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNMTGFCRLSQLKVADFSYNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRISVQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILSAIQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHCYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPAFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGNVSSQGAVCVLPNSLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELKHFRYEDLKAICEVITLCINPDHSVRPSMRELCTMLESKIDTTINLELKASSLAWAELALSS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00125 662 SUPERFAMILY Protein kinase-like (PK-like) 341 637 IPR011009 -
Gma08g00125 662 PANTHER PROTEIN MALE DISCOVERER 2 7 662 - -
Gma08g00125 662 Gene3D Ribonuclease Inhibitor 141 259 IPR032675 -
Gma08g00125 662 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Gma08g00125 662 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Gma08g00125 662 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Gma08g00125 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Gma08g00125 662 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00125 662 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 662 - -
Gma08g00125 662 Pfam Protein tyrosine and serine/threonine kinase 367 635 IPR001245 GO:0004672|GO:0006468
Gma08g00125 662 SUPERFAMILY L domain-like 28 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00125 Gma-Chr8 1067146 1071369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00125 7 642 Receptor kinase-like Gene Family AT2G35620 28.092 5.52e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma08g00125 PK_Tyr_Ser-Thr 9.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00125 - - gmx:100781978 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00125 08 1067146 1071369 Gma08g00125 08 1067146 1071369 ECH
Gma05g02020 05 41531480 41536077 Gma08g00125 08 1067146 1071369 GST
Gma01g02191 01 57174713 57178948 Gma08g00125 08 1067146 1071369 PCT
Gma11g00226 11 1763403 1768362 Gma08g00125 08 1067146 1071369 PCT