Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00087 ATGGATGATGGCCACCAACACGAAAACAGCAGGCATAAGATGGAATTCTACAGAGGAGCACGTTCCCTGTGGAATACTGATTCCCAGCATCAAGTAAAAGAGCCAAATGCACTAGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGAAATTGAACTAGAGACTGCTATATCTGAAAAGAATGAAGCCTTAGCTGCTCGAGATGCAGCCATTCAGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTTTTGGAACGAGATAATGCCCTTGCTGCCCTTCAGAGTCGGAACAATTCTGTCAACTTCCCATTCGGTGGTGGAATTCAATGTGGATCAAAACGGATGCACCATTCTTCAAACCATCTATCTAACATGACTGAAGCTGCATACAGCACAAAGGATATGATAATAAGAGATGCCTCCCCGGTGACTGTTATACCTTCTGAAGCTGTCAATTCTCATCAAGCAAAGAGAACAAAGCAGAACAAGGTAATTAATTCAAAGGCATCAAAGCCACCCTGCAAAGTAAAGAAAATGGGGGAGGATTTAAATAGGCAGGCTTCTTCTGAAGGGACAAAGATCAGATCTGAATGGGATAAGCAGGATGTTGGCCTGAATTTGGTTGCATTTGATGAAACTATCATGCCGGTCCCAGTTTGCACATGTACGGGCATACCACGACAGTGCTACAAATGGGGGAATGGGGGATGGCAGTCATCTTGTTGTACCACAACATTGTCTATGTATCCACTACCACAACTTCCAAACAAGCGCCATGCCCGCATTGGAGGACGAAAGATGAGCGGAAGTGTCTTCACAAGACTTCTCAGTAGGTTGGTGTCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGGAATACTGGGCAAGACATGGAACAAATCGCTACATCACTATCAAGTAA 954 0.4423 MDDGHQHENSRHKMEFYRGARSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILEIELETAISEKNEALAARDAAIQQRDEALAQRDNALLERDNALAALQSRNNSVNFPFGGGIQCGSKRMHHSSNHLSNMTEAAYSTKDMIIRDASPVTVIPSEAVNSHQAKRTKQNKVINSKASKPPCKVKKMGEDLNRQASSEGTKIRSEWDKQDVGLNLVAFDETIMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVSEGHDLSIPLDLKEYWARHGTNRYITIK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00087 317 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 317 - -
Gma08g00087 317 PANTHER - 1 317 IPR010409 -
Gma08g00087 317 Pfam GAGA binding protein-like family 1 317 IPR010409 -
Gma08g00087 317 SMART GAGA_bind_2 1 317 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00087 Gma-Chr8 753799 754849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00087 1 317 BBR or BPC Transcription factor family AT2G21240 57.994 2.21e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gma08g00087 GAGA_bind 8.3e-101 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00087 - - gmx:100785547 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01982 05 41166868 41169524 Gma08g00087 08 753799 754849 GST