Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00081 ATGAAGAACTTAGCAACATGGAAAACCATGGCAATTACTGTTGTGTTGCTTCAGCTGAGCTTTTCCTTGGAGATTTTCTGCCTCTCTTATCATGCAGATAGAATTGTTCGGCTTCCCGGGCAGCCCAACATAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCAGCTTCAAAGCCGCTTGTTCTCTGGCTCAATGGAGGACCAGGTTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGAGAAGTTCTGATTAAAAATGAGTACAGTTGGAACAGAGAAACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGACACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCATTACAGACACACAGATTTGTTTCTAGCAGGTGAAAGTTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGATGTTCAATCTGAAAGGAATAGCCTTGGGTAATCCAGTTCTAGAATATGCCACTGATTTTAACTCAAGGGCTGAGTTCTTTTGGTCTCATGGATTGATATCAGATTCAACATACAAATTGTTCACTACAGGTTGTAATTATTCGCGGTATGTCAGTGAATACTATAGAGACTCAATTTCGCCACTTTGTTCAAAGGTTATGAAGCAAGTAAGCAGAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGTATTTCCTCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAAGCCAACAAACAAACGAGAGCATAGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAAAGATGTACAAGAGGCACTCCATGCCAAGCTTGTTGGAGTTCAAAAGTGGAATGTTTGCAGCACTAACAGCATTCTGGACTATGATATGCTCAACTTGGAGGTACCTACACTCCCTATAGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTGGTTCAAAAGCTTGCTAGACAACTAAGGCTGAATACAACAATCCATTATAGAGTATGGTTTGAGGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCAACAGTCAGAGGAGCCTCCCATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTTTTGTTCAAGTCATTCTTGGAAGATAGGCCCCTACCAGAAATTTTCTGA 1407 0.4122 MKNLATWKTMAITVVLLQLSFSLEIFCLSYHADRIVRLPGQPNIGFQQFSGYVTVDDMKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGSSYDTVNDETTARDNLVFLQRWFNKFPHYRHTDLFLAGESYAGHYVPQLAKLMIEINKKEKMFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVMKQVSRETSKFVDKYDVTLDVCISSVLSQSKAICPQSQQTNESIDVCVDDKVTNYLNRKDVQEALHAKLVGVQKWNVCSTNSILDYDMLNLEVPTLPIVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLRLNTTIHYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00081 468 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Gma08g00081 468 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Gma08g00081 468 PANTHER CARBOXYPEPTIDASE 28 466 - -
Gma08g00081 468 SUPERFAMILY alpha/beta-Hydrolases 30 465 IPR029058 -
Gma08g00081 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 466 IPR001563 GO:0004185|GO:0006508
Gma08g00081 468 Gene3D - 362 460 - -
Gma08g00081 468 Pfam Serine carboxypeptidase 42 460 IPR001563 GO:0004185|GO:0006508
Gma08g00081 468 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Gma08g00081 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Gma08g00081 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Gma08g00081 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Gma08g00081 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Gma08g00081 468 Gene3D - 314 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00081 Gma-Chr8 701183 703933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00081 322 464 Calmodulin-binding Proteins AT2G22960 28.671 1.39e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00081 K16297 - gmx:100800002 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00081 08 701183 703933 Gma08g00081 08 701183 703933 ECH