Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00080 ATGTGGGAGTGGACATTGCAGGGCAAAGGCCAAGAGAGAGAATTGGAACTGGAAAGGGAGGTTGAGATTGAGGCCCCATTGCCTCTCACTGTTACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACCGCAAATTATCGTTCTTCTGGCTTCCCTCACCGCACTTCCACCACCATGCCTTCTAGCTCTTGCATCAGAGGATCGTTGGAGAATTCAAAATTGGAGCTGCATCCTGATCAGACAGAAACTAGCTTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGACATTGAATCTGGCTCCTTTTCCTGGGACATGCTCTCTTCACTGCACCACACTGAACACAGCAGTAGCAACGAACATTCCGAGGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCAGGAGGAGTTGTCTTCTTTGCCTTTTTCAATATCCCTGGGAATGCTGATGCTAGTCCAAAAGAAGCAGCAGCTGTTATAAAGATAGCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAACTTGCCAAGTGGATGGGAGTCCAAACTCCACAGGCTAGAGTTATTCACAATACCTGTTTAGAATGGCAACAAATAAAGGAAGCTTCAGAAAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAAGTGACATGTTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTCTCTTTTTTATGAGTTATGTACATGGTTCACCCTTGCTTGAAAACTCCAGTGCATTTAAGTCAAGGGAATCTGCAGAAAGAACGTCAGAAGCTCTTGGCAGGGTACTGATGCTGGACCTTGTCATCAGAAACGAAGATAGACTGCCTTGCCGTGAGCTTAGATGGCGAGGAAATCCTGCAAATTTGCTGTTGGCTGGAAAGAATATCTGTGCAAATACAGATGCACTAGAAGCAGCTTTTGATTCTGCAGTTAACCGATATAGACCAAAGGTGATCAGGGCATTTCATAAAGAAAGAAGGTCAACTTCAGTAGATTGCAGACTTGATTCTCATAATCCCGGCTTGATATCACAATCTTCTGATCTCTCGGACATCACAGAATCACCAAGATCTGCTGACATGAGCTTTCAAACATCGGGAGAATCACTGTCTCCTGACTTTAACATTGTAGCTATTGATTCTGGTGTTCCTCGGCGACCGCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTGCTGGTCAATAGTTCTGAATTTGCCTCAAACCTGTTATATGATATAACCGGAGCGAAATTAGGATGTCCCCCACCAGAAGACATGGAAAAAACTGATGTACGTATTATAAGTGACACAATGTTTGTAGTTCATGCATTTCGTAATGGTTTCCGTGCTGCTCTTAGGGATCTGCAGGGATTCCATATATTCCTACTCACACTTCACCAAAGACTTGATACTTTGTTGCGATCATTTATGAACATTATAAGCAAAATATCTTTGGGGGAATTTGACAAAGAAGATTCTGTGGTTCCTGACTCACCTTCACTAACTGCTGGTGGGAGTTGTTCCTCTCCAACATGTAAGGAAAGACTTACTAATGATAACCATCAAGATTTTATTGATTCAGAATCACAGAGAACTGCTTTAAGATCATCATCTTCTGGCAATAGAGATTGCAGTGACTCTACTCCTATGTCAAGAGAAACTTGGCATGGAAAGTTCTGTAAAGGAAATGGGGAACCACTTCGTAGTCTCCGTTTGACTGCTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGTGATGCCATCAAACTATGCCAGGAGAACAATTTCAACCCAGGATTTTTTGAGGGTAGTGATAATAACTGTGTCGTTGATGCATATGAACTTAAGGTCAGACTTGAGCATATTCTCGAGAGAATTGCATTGATATCAGACGCTGCAAGTACTGAGAAACCTTCAGCAGTGACAAGTAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTACAAGAATTTCTCTGTATGTGACAGTGATGATTATAACATCAGCAGCATATTTGAAGAAGCGTGTGATTTTATAGACTATGTTGAACAAACAGGTCAAAAAGTTTTAGTTCATTGCTTTGAGGGGAGAAGCAGAAGTGTCACGTTGGTCCTCGCTTACTTAATGCTCAGGAAGAATCATACTTTATCAGAAGCATGGCAAGCTCTGAAACGAGTTCACCGTCGAGCACAACCCAATGACGGTTTTGCAAAGATCTTGTTAGAATTGGATCAGAAACTTCATGGAAAGGTTTCAATGGAATGGCATCAGCGCAAACCAGTGATGAAAATCTGCCCCATATGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTCAAACTACATCTTCAGAAATCACATAAAAAGCTATCATCTGGGAGTGTAGATAGTGCCATGACTATGGAAATCCAGAAAGCATTAACAGCTTTGAAGATTAGCCGTGGTGGGAGTGTCAGCCCCACACAAAGATCATCTCATCCACTAATAGATCAATAG 2757 0.424 MWEWTLQGKGQERELELEREVEIEAPLPLTVTSRVLYMLGDITAGPAFRFTQWLQLVRKRTANYRSSGFPHRTSTTMPSSSCIRGSLENSKLELHPDQTETSLWERLGKAAMLDIESGSFSWDMLSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNIPGNADASPKEAAAVIKIASSRMATQSERLGYELAKWMGVQTPQARVIHNTCLEWQQIKEASEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLENSSAFKSRESAERTSEALGRVLMLDLVIRNEDRLPCRELRWRGNPANLLLAGKNICANTDALEAAFDSAVNRYRPKVIRAFHKERRSTSVDCRLDSHNPGLISQSSDLSDITESPRSADMSFQTSGESLSPDFNIVAIDSGVPRRPPAGKRANDQVNYPKLVELLVNSSEFASNLLYDITGAKLGCPPPEDMEKTDVRIISDTMFVVHAFRNGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKISLGEFDKEDSVVPDSPSLTAGGSCSSPTCKERLTNDNHQDFIDSESQRTALRSSSSGNRDCSDSTPMSRETWHGKFCKGNGEPLRSLRLTAKLRDFHKFAKVDAESNKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNCVVDAYELKVRLEHILERIALISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDSDDYNISSIFEEACDFIDYVEQTGQKVLVHCFEGRSRSVTLVLAYLMLRKNHTLSEAWQALKRVHRRAQPNDGFAKILLELDQKLHGKVSMEWHQRKPVMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHPLIDQ 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00080 918 MobiDBLite consensus disorder prediction 566 589 - -
Gma08g00080 918 MobiDBLite consensus disorder prediction 527 546 - -
Gma08g00080 918 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 760 812 IPR000387 GO:0016311|GO:0016791
Gma08g00080 918 MobiDBLite consensus disorder prediction 565 589 - -
Gma08g00080 918 Gene3D Protein tyrosine phosphatase superfamily 674 846 IPR029021 -
Gma08g00080 918 Gene3D - 268 379 IPR036940 GO:0016301
Gma08g00080 918 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 7 918 - -
Gma08g00080 918 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 691 836 IPR029021 -
Gma08g00080 918 ProSiteProfiles Dual specificity protein phosphatase domain profile. 691 836 IPR020422 GO:0006470|GO:0008138
Gma08g00080 918 SMART dsp_5 691 833 IPR020422 GO:0006470|GO:0008138
Gma08g00080 918 MobiDBLite consensus disorder prediction 374 396 - -
Gma08g00080 918 CDD DSP 692 829 - -
Gma08g00080 918 Pfam Dual specificity phosphatase, catalytic domain 712 832 IPR000340 GO:0008138|GO:0016311
Gma08g00080 918 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 7 918 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gma08g00080 918 Pfam Actin-fragmin kinase, catalytic 100 379 IPR015275 -
Gma08g00080 918 SUPERFAMILY Protein kinase-like (PK-like) 52 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00080 Gma-Chr8 690564 697645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00080 7 914 Protein tyrosine phosphatase (PTP) family AT5G23720 64.572 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00080 K14165 - gmx:100799468 1743.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00080 08 690564 697645 Gma08g00080 08 690564 697645 ECH
Gma05g01976 05 41105793 41112459 Gma08g00080 08 690564 697645 GST