Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00077 ATGGCTGAACGCCGCCGAAGGAAGAAGCTCAATGATAGACTCTACATGCTGCTGAGATCCGTTGTTCCTAATATTAGCAAAATGGACAGGGCTTCAATCCTTGGGGATGCAATCGAGTATTTGAAGGAACTTCTGCAAAGGATCAGTGAGCTTCGCAATGAATTGGAGTCAACACCTGCAGCAGGTGCCTCTTCAAGCTTTCTTCTTCATCCTTTGACACCCACTACTCTACCAACACGTATGCAAGAAGAACTTTGTCTCAGCTCGTTGCCAAGCCCTAATGCCCAACCTGCTAGTGCTAGGGTTGAGGTTGGGTTGCGCGAAGGAAGAGCTATGGATATTTTCAGAGCTGAGCAACGCAACGAAGGTCAAGATGTTCATCCGGAGAAAATAAAAGCAGTTTTGTTGGATTCAGCTGGTGGCTTCCATAGCATGACCTAA 441 0.4694 MAERRRRKKLNDRLYMLLRSVVPNISKMDRASILGDAIEYLKELLQRISELRNELESTPAAGASSSFLLHPLTPTTLPTRMQEELCLSSLPSPNAQPASARVEVGLREGRAMDIFRAEQRNEGQDVHPEKIKAVLLDSAGGFHSMT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00077 146 PANTHER BHLH TRANSCRIPTIONAL FACTOR 1 112 - -
Gma08g00077 146 PANTHER BHLH TRANSCRIPTIONAL FACTOR 110 143 - -
Gma08g00077 146 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 44 IPR011598 GO:0046983
Gma08g00077 146 Coils Coil 34 61 - -
Gma08g00077 146 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 112 - -
Gma08g00077 146 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 110 143 - -
Gma08g00077 146 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Gma08g00077 146 Gene3D - 1 59 IPR036638 GO:0046983
Gma08g00077 146 SMART finulus 1 50 IPR011598 GO:0046983
Gma08g00077 146 Pfam Helix-loop-helix DNA-binding domain 2 44 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00077 Gma-Chr8 667108 669536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00077 1 114 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 74.790 3.95e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma08g00077 HLH 2.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00077 - - gmx:100217334 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01467 06 14025083 14028576 Gma08g00077 08 667108 669536 ECH
Gma08g00077 08 667108 669536 Gma08g00077 08 667108 669536 ECH
Gma05g01974 05 41080602 41084800 Gma08g00077 08 667108 669536 GST
Gma08g00077 08 667108 669536 Gma04g01939 04 49804612 49808155 PCT
Gma08g00077 08 667108 669536 Gma06g01467 06 14025083 14028576 PCT
Gma04g01939 04 49804612 49808155 Gma08g00077 08 667108 669536 PCT
Gma06g01467 06 14025083 14028576 Gma08g00077 08 667108 669536 PCT