Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00048 ATGGATAAGTATGAGGCTGTCAAGGATTTGGGAGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTTGTTGCCATGAAATACATCGAGCGTGGCCAAAAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCACAGATCCCTTCGGCACCCCAATATAATTCGCTTCAAGGAGGCAAGGACCTTATTTGtggttttgacccccacccatttggccatagtgatggagtatgcggctggaggagagctctttgagaggatatgcaatgctggcaggttcagtgaagatgagGCTAGATATTTCTTTCAGCAGCTGATTTCTGGTGTACATTACTGTCATGCCATGCAAATATGTCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGCCCTGCACCCCGCCTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCATTACTTCATTCACGACCAAAATCAACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCCAGGAGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGAGTGACTCTTTATGTCATGCTGGTTGGAGCTTATCCCTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGACTGCAGACACCTCCTTTCTCGTATATTTGTAGCAAATCCATTAAGGAGGATCTCTCTTAAGGAAATTAAGAGCCACCCATGGTTTTTAAAGAATCTTCCAAGAGAGCTGACTGAATCAGCTCAAGCTGTCTATTACCAGAGAGGCAATCCAAGCTTTTCAATTCAAAGTGTGGAGGAGATCATGAAGATTGTGGGAGAGGCAAGGGACCCTCCTCCAGTATCTAGACCTGTCAAAGGTTTTGGCTGGGATGGCGAAGAAGATGAAGGGGAAGAAGACGTGGAGGAAGAGGAGGACGAAGAAGACGAGTATGACAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTTCAAATCATGCACCCTCTGCTTAGGAGTAGTGCTCCTTTCTCTTCCAGTTTTGTGGGAATTTGTAACAGAGCGAAATTTCCTCTGCTGTTGCCACAGGCAATCCATACCTCTCAAAAGATGTATCGCTGCTCTGGAGGCCATGTGGAGTCTTCTACTAACATTAATCCCTTGAAAAATTGTGTAGTGGGAAGAAGTACTTTAGGATGGTTTGAAACTCAACCCTTGGTTTCTGAGCAATTACTCAACAGGCGCTTGTTGTCAGTGGAAGCTTTAGTCACTCCCACAGTTCAAGATTTTTCTGATACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCAGATATTATACGACTGCCAAGGTTATTTAGCTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTTTAAGAGCACCTAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGATCTCCTCTTAGACGTATAACTGATGCACAGGCACGGCACTTTCCAATAACTTATTTTCCATACATCACTACAGCTGAAGAATTGAGGAAATCTCTTTGGTCAAAGAATGTCCCAGCCAAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACTGAAGAGGCTATTGAACAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGTGGTTCAAGTCTTCGTCTCTTGGAGAGTATATTCAGAGATGATGAGTACCTAGTCAACATGCAGCACACAGTAATTCCTTCATGGTACCAGCGTGAAGGATACATTAAGGCCATGACAAATTTAATTGAAAAGGAGCTAAAAGGTTTTGACTGccctgaggagGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTTGATTTGATCATGGAAGAGCTTGAAAAGAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGATGAGACAATAATTGAACTTGGGAAAAAGGGAGTAAAAAGCCTGCTGGCTGTACCAATTAGCTTTGTCAGCGAGCATATTGAAACTCTCGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTAAACTCTGGTATAGAAAAATGGGGTCGTGTTCCTGCGCTAGGAACTGAAACCACTTTCATTTCAGATTTGGCAGATGCTGTAATTGAGAGTCTCCCTTATGTTGGTGCAATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCACTGGGCAGCGTAGAAGAGTTATTGACAGCATATGACTCGCAACGTAGGGAGTTGCCACCACCAGTAATTGTGTGGGAATGGGGATGGACCAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAAGGGTTTCTGCACCAGTGGGGAATATTGCCCTTGTTTAGTTACAGAATATTCTTATTTCTAGGACCATTTCTTGGAAGTCCACAATATGAATGTAAATGCATTAAAATGTACATGCGAAGTGGAGAGTTGGAGAAGGAGAGGGATTTCTATGACATCAAGTTGGACTTGCTTACGATGACTGTAGGAAGAGTTGAGTTGGAGAAGGAAGAACTAGAAAAGGGGTCTAGACTTGTGTCGCGGGAAGAAGAGAAGAAGTGA 2886 0.4092 MDKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGQKIDENVAREIINHRSLRHPNIIRFKEARTLFVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRISLKEIKSHPWFLKNLPRELTESAQAVYYQRGNPSFSIQSVEEIMKIVGEARDPPPVSRPVKGFGWDGEEDEGEEDVEEEEDEEDEYDKRVKEVHASGEFQIMHPLLRSSAPFSSSFVGICNRAKFPLLLPQAIHTSQKMYRCSGGHVESSTNINPLKNCVVGRSTLGWFETQPLVSEQLLNRRLLSVEALVTPTVQDFSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRITDAQARHFPITYFPYITTAEELRKSLWSKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFRDDEYLVNMQHTVIPSWYQREGYIKAMTNLIEKELKGFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALNSGIEKWGRVPALGTETTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLTAYDSQRRELPPPVIVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFSYRIFLFLGPFLGSPQYECKCIKMYMRSGELEKERDFYDIKLDLLTMTVGRVELEKEELEKGSRLVSREEEKK 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00048 961 Pfam Ferrochelatase 462 799 IPR001015 GO:0004325|GO:0006783
Gma08g00048 961 Gene3D - 462 799 - -
Gma08g00048 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma08g00048 961 Hamap Coproporphyrin III ferrochelatase [cpfC]. 461 800 IPR001015 GO:0004325|GO:0006783
Gma08g00048 961 Coils Coil 323 350 - -
Gma08g00048 961 SUPERFAMILY Chlorophyll a-b binding protein 844 884 - -
Gma08g00048 961 CDD Ferrochelatase_C 645 783 IPR033644 -
Gma08g00048 961 ProSiteProfiles Protein kinase domain profile. 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00048 961 PANTHER SERINE/THREONINE KINASE 2 351 - -
Gma08g00048 961 SUPERFAMILY Chelatase 461 806 - -
Gma08g00048 961 MobiDBLite consensus disorder prediction 321 340 - -
Gma08g00048 961 Gene3D - 638 781 - -
Gma08g00048 961 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 351 - -
Gma08g00048 961 CDD Ferrochelatase_N 463 639 IPR033659 -
Gma08g00048 961 ProSitePatterns Ferrochelatase signature. 666 687 IPR019772 GO:0004325|GO:0006783
Gma08g00048 961 Pfam Protein kinase domain 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00048 961 TIGRFAM hemH: ferrochelatase 461 800 IPR001015 GO:0004325|GO:0006783
Gma08g00048 961 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gma08g00048 961 SMART serkin_6 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00048 961 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Gma08g00048 961 Gene3D Transferase(Phosphotransferase) domain 1 85 273 - -
Gma08g00048 961 CDD STKc_SnRK2 3 264 - -
Gma08g00048 961 SUPERFAMILY Protein kinase-like (PK-like) 1 266 IPR011009 -
Gma08g00048 961 MobiDBLite consensus disorder prediction 308 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00048 Gma-Chr8 397455 412835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00048 3 268 CBL-interacting serine-threonine protein kinases AT4G24400 41.818 6.34e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gma08g00048 Ferrochelatase 5.2e-104 CL0043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00048 K01772 - gmx:100780533 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01940 05 40791944 40799226 Gma08g00048 08 397455 412835 GST
Gma08g00048 08 397455 412835 Gma04g01987 04 50320767 50324390 PCT
Gma08g00048 08 397455 412835 Gma06g01426 06 13552148 13554845 PCT
Gma04g01987 04 50320767 50324390 Gma08g00048 08 397455 412835 PCT
Gma06g01426 06 13552148 13554845 Gma08g00048 08 397455 412835 PCT